Literature DB >> 12857822

Arabidopsis UVH6, a homolog of human XPD and yeast RAD3 DNA repair genes, functions in DNA repair and is essential for plant growth.

Zongrang Liu1, Suk-Whan Hong, Mindy Escobar, Elizabeth Vierling, David L Mitchell, David W Mount, Jennifer D Hall.   

Abstract

To evaluate the genetic control of stress responses in Arabidopsis, we have analyzed a mutant (uvh6-1) that exhibits increased sensitivity to UV light, a yellow-green leaf coloration, and mild growth defects. We have mapped the uvh6-1 locus to chromosome I and have identified a candidate gene, AtXPD, within the corresponding region. This gene shows sequence similarity to the human (Homo sapiens) XPD and yeast (Saccharomyces cerevisiae) RAD3 genes required for nucleotide excision repair. We propose that UVH6 is equivalent to AtXPD because uvh6-1 mutants carry a mutation in a conserved residue of AtXPD and because transformation of uvh6-1 mutants with wild-type AtXPD DNA suppresses both UV sensitivity and other defective phenotypes. Furthermore, the UVH6/AtXPD protein appears to play a role in repair of UV photoproducts because the uvh6-1 mutant exhibits a moderate defect in the excision of UV photoproducts. This defect is also suppressed by transformation with UVH6/AtXPD DNA. We have further identified a T-DNA insertion in the UVH6/AtXPD gene (uvh6-2). Plants carrying homozygous insertions were not detected in analyses of progeny from plants heterozygous for the insertion. Thus, homozygous insertions appear to be lethal. We conclude that the UVH6/AtXPD gene is required for UV resistance and is an essential gene in Arabidopsis.

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Year:  2003        PMID: 12857822      PMCID: PMC167080          DOI: 10.1104/pp.103.021808

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  40 in total

Review 1.  DNA repair, DNA replication, and UV mutagenesis.

Authors:  W G McGregor
Journal:  J Investig Dermatol Symp Proc       Date:  1999-09

Review 2.  Nucleotide excision repair in yeast.

Authors:  S Prakash; L Prakash
Journal:  Mutat Res       Date:  2000-06-30       Impact factor: 2.433

3.  The Arabidopsis UVH1 gene is a homolog of the yeast repair endonuclease RAD1.

Authors:  A L Fidantsef; D L Mitchell; A B Britt
Journal:  Plant Physiol       Date:  2000-10       Impact factor: 8.340

Review 4.  The xeroderma pigmentosum group D (XPD) gene: one gene, two functions, three diseases.

Authors:  A R Lehmann
Journal:  Genes Dev       Date:  2001-01-01       Impact factor: 11.361

Review 5.  Nucleotide excision repair and human syndromes.

Authors:  J de Boer; J H Hoeijmakers
Journal:  Carcinogenesis       Date:  2000-03       Impact factor: 4.944

Review 6.  Damage recognition in nucleotide excision repair of DNA.

Authors:  D P Batty; R D Wood
Journal:  Gene       Date:  2000-01-11       Impact factor: 3.688

Review 7.  Genomic heterogeneity of nucleotide excision repair.

Authors:  A S Balajee; V A Bohr
Journal:  Gene       Date:  2000-05-30       Impact factor: 3.688

8.  AtRAD1, a plant homologue of human and yeast nucleotide excision repair endonucleases, is involved in dark repair of UV damages and recombination.

Authors:  F Gallego; O Fleck; A Li; J Wyrzykowska; B Tinland
Journal:  Plant J       Date:  2000-03       Impact factor: 6.417

9.  Repair of UV damage in plants by nucleotide excision repair: Arabidopsis UVH1 DNA repair gene is a homolog of Saccharomyces cerevisiae Rad1.

Authors:  Z Liu; G S Hossain; M A Islas-Osuna; D L Mitchell; D W Mount
Journal:  Plant J       Date:  2000-03       Impact factor: 6.417

10.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

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  27 in total

Review 1.  Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.

Authors:  Alma Balestrazzi; Massimo Confalonieri; Anca Macovei; Mattia Donà; Daniela Carbonera
Journal:  Plant Cell Rep       Date:  2010-12-19       Impact factor: 4.570

2.  qUVR-10, a major quantitative trait locus for ultraviolet-B resistance in rice, encodes cyclobutane pyrimidine dimer photolyase.

Authors:  Tadamasa Ueda; Tadashi Sato; Jun Hidema; Tokuhisa Hirouchi; Kazuo Yamamoto; Tadashi Kumagai; Masahiro Yano
Journal:  Genetics       Date:  2005-06-18       Impact factor: 4.562

3.  Overexpression of rice OsREX1-S, encoding a putative component of the core general transcription and DNA repair factor IIH, renders plant cells tolerant to cadmium- and UV-induced damage by enhancing DNA excision repair.

Authors:  Shuta Kunihiro; Hikaru Kowata; Youichi Kondou; Shinya Takahashi; Minami Matsui; Thomas Berberich; Shohab Youssefian; Jun Hidema; Tomonobu Kusano
Journal:  Planta       Date:  2014-02-23       Impact factor: 4.116

4.  Arabidopsis cockayne syndrome A-like proteins 1A and 1B form a complex with CULLIN4 and damage DNA binding protein 1A and regulate the response to UV irradiation.

Authors:  Caiguo Zhang; Huiping Guo; Jun Zhang; Guangqin Guo; Karen S Schumaker; Yan Guo
Journal:  Plant Cell       Date:  2010-07-09       Impact factor: 11.277

5.  Heat stress phenotypes of Arabidopsis mutants implicate multiple signaling pathways in the acquisition of thermotolerance.

Authors:  Jane Larkindale; Jennifer D Hall; Marc R Knight; Elizabeth Vierling
Journal:  Plant Physiol       Date:  2005-05-27       Impact factor: 8.340

Review 6.  Proliferating cell nuclear antigen (PCNA): a key factor in DNA replication and cell cycle regulation.

Authors:  Wojciech Strzalka; Alicja Ziemienowicz
Journal:  Ann Bot       Date:  2010-12-17       Impact factor: 4.357

7.  Genome stability in the uvh6 mutant of Arabidopsis thaliana.

Authors:  Andriy Bilichak; Youli Yao; Viktor Titov; Andrey Golubov; Igor Kovalchuk
Journal:  Plant Cell Rep       Date:  2014-02-20       Impact factor: 4.570

8.  AtREV1, a Y-family DNA polymerase in Arabidopsis, has deoxynucleotidyl transferase activity in vitro.

Authors:  Shinya Takahashi; Ayako N Sakamoto; Atsushi Tanaka; Kikuo Shimizu
Journal:  Plant Physiol       Date:  2007-09-07       Impact factor: 8.340

9.  Overexpression of Arabidopsis damaged DNA binding protein 1A (DDB1A) enhances UV tolerance.

Authors:  Wesam M Al Khateeb; Dana F Schroeder
Journal:  Plant Mol Biol       Date:  2009-03-14       Impact factor: 4.076

10.  DNA repair in higher plants; photoreactivation is the major DNA repair pathway in non-proliferating cells while excision repair (nucleotide excision repair and base excision repair) is active in proliferating cells.

Authors:  Seisuke Kimura; Yasue Tahira; Toyotaka Ishibashi; Yoko Mori; Toshio Mori; Junji Hashimoto; Kengo Sakaguchi
Journal:  Nucleic Acids Res       Date:  2004-05-18       Impact factor: 16.971

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