Literature DB >> 17827267

AtREV1, a Y-family DNA polymerase in Arabidopsis, has deoxynucleotidyl transferase activity in vitro.

Shinya Takahashi1, Ayako N Sakamoto, Atsushi Tanaka, Kikuo Shimizu.   

Abstract

To clarify the functions of the Arabidopsis thaliana REV1 (AtREV1) protein, we expressed it in Escherichia coli and purified it to near homogeneity. The deoxynucleotidyl transferase activity of the recombinant AtREV1 was examined in vitro using a primer extension assay. The recombinant AtREV1 transferred one or two nucleotides to the primer end. It efficiently inserted dCMP regardless of the opposite base. AtREV1 also inserted a dCMP opposite an apurinic/apyrimidinic site, which is physiologically generated or induced by various DNA-damaging agents. In contrast, AtREV1 had no insertion activities against UV-inducible DNA lesions as reported in yeast or mammalian system. Although the substrate specificity of AtREV1 was rather narrow in the presence of magnesium ion, it widened in the presence of manganese ion. These results suggest that AtREV1 serves as a deoxycytidyl transferase in plant cells.

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Year:  2007        PMID: 17827267      PMCID: PMC2048784          DOI: 10.1104/pp.107.101980

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  50 in total

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Authors:  L Haracska; I Unk; R E Johnson; E Johansson; P M Burgers; S Prakash; L Prakash
Journal:  Genes Dev       Date:  2001-04-15       Impact factor: 11.361

2.  Arabidopsis thaliana AtPOLK encodes a DinB-like DNA polymerase that extends mispaired primer termini and is highly expressed in a variety of tissues.

Authors:  Maria Victoria García-Ortiz; Rafael R Ariza; Peter D Hoffman; John B Hays; Teresa Roldán-Arjona
Journal:  Plant J       Date:  2004-07       Impact factor: 6.417

3.  Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution.

Authors:  S Doublié; S Tabor; A M Long; C C Richardson; T Ellenberger
Journal:  Nature       Date:  1998-01-15       Impact factor: 49.962

4.  The human REV1 gene codes for a DNA template-dependent dCMP transferase.

Authors:  W Lin; H Xin; Y Zhang; X Wu; F Yuan; Z Wang
Journal:  Nucleic Acids Res       Date:  1999-11-15       Impact factor: 16.971

5.  Genome-wide variation of the somatic mutation frequency in transgenic plants.

Authors:  I Kovalchuk; O Kovalchuk; B Hohn
Journal:  EMBO J       Date:  2000-09-01       Impact factor: 11.598

6.  Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.

Authors:  Narottam Acharya; Robert E Johnson; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

7.  Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.

Authors:  Alexandra Vaisman; Hong Ling; Roger Woodgate; Wei Yang
Journal:  EMBO J       Date:  2005-08-18       Impact factor: 11.598

8.  Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis.

Authors:  Caixia Guo; Paula L Fischhaber; Margaret J Luk-Paszyc; Yuji Masuda; Jing Zhou; Kenji Kamiya; Caroline Kisker; Errol C Friedberg
Journal:  EMBO J       Date:  2003-12-15       Impact factor: 11.598

9.  Arabidopsis UVH6, a homolog of human XPD and yeast RAD3 DNA repair genes, functions in DNA repair and is essential for plant growth.

Authors:  Zongrang Liu; Suk-Whan Hong; Mindy Escobar; Elizabeth Vierling; David L Mitchell; David W Mount; Jennifer D Hall
Journal:  Plant Physiol       Date:  2003-07       Impact factor: 8.340

Review 10.  Abasic sites in DNA: repair and biological consequences in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Marie Guillet
Journal:  DNA Repair (Amst)       Date:  2004-01-05
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  6 in total

1.  Role of AtPolζ, AtRev1, and AtPolη in UV light-induced mutagenesis in Arabidopsis.

Authors:  Mayu Nakagawa; Shinya Takahashi; Atsushi Tanaka; Issay Narumi; Ayako N Sakamoto
Journal:  Plant Physiol       Date:  2010-10-28       Impact factor: 8.340

2.  Deletion of TLS polymerases promotes homologous recombination in Arabidopsis.

Authors:  A N Sakamoto; H Kaya; M Endo
Journal:  Plant Signal Behav       Date:  2018-06-26

3.  Role of AtPolζ, AtRev1 and AtPolη in γ ray-induced mutagenesis.

Authors:  Mayu Nakagawa; Shinya Takahashi; Issay Narumi; Ayako N Sakamoto
Journal:  Plant Signal Behav       Date:  2011-05-01

4.  A role for PCNA2 in translesion synthesis by Arabidopsis thaliana DNA polymerase eta.

Authors:  Bernard A Kunz
Journal:  Plant Signal Behav       Date:  2008-10

Review 5.  Translesion Synthesis in Plants: Ultraviolet Resistance and Beyond.

Authors:  Ayako N Sakamoto
Journal:  Front Plant Sci       Date:  2019-10-09       Impact factor: 5.753

Review 6.  The Dark Side of UV-Induced DNA Lesion Repair.

Authors:  Wojciech Strzałka; Piotr Zgłobicki; Ewa Kowalska; Aneta Bażant; Dariusz Dziga; Agnieszka Katarzyna Banaś
Journal:  Genes (Basel)       Date:  2020-12-02       Impact factor: 4.096

  6 in total

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