Literature DB >> 21170715

Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.

Alma Balestrazzi1, Massimo Confalonieri, Anca Macovei, Mattia Donà, Daniela Carbonera.   

Abstract

Crop productivity is strictly related to genome stability, an essential requisite for optimal plant growth/development. Genotoxic agents (e.g., chemical agents, radiations) can cause both chemical and structural damage to DNA. In some cases, they severely affect the integrity of plant genome by inducing base oxidation, which interferes with the basal processes of replication and transcription, eventually leading to cell death. The cell response to oxidative stress includes several DNA repair pathways, which are activated to remove the damaged bases and other lesions. Information concerning DNA repair in plants is still limited, although results from gene profiling and mutant analysis suggest possible differences in repair mechanisms between plants and other eukaryotes. The present review focuses on the base- and nucleotide excision repair (BER, NER) pathways, which operate according to the most common DNA repair rule (excision of damaged bases and replacement by the correct nucleotide), highlighting the most recent findings in plants. An update on DNA repair in organelles, chloroplasts and mitochondria is also provided. Finally, it is generally acknowledged that DNA repair plays a critical role during seed imbibition, preserving seed vigor. Despite this, only a limited number of studies, described here, dedicated to seeds are currently available.

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Year:  2010        PMID: 21170715     DOI: 10.1007/s00299-010-0975-9

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  72 in total

1.  Functional characterization of a mammalian transcription factor, Elongin A.

Authors:  Takashi Yasukawa; Kazuto Sugimura; Mizue Fukuda; Katsuhisa Yamazaki; Shigetaka Kitajima; Katsuzumi Okumura; Teijiro Aso
Journal:  Biochem Biophys Res Commun       Date:  2006-11-13       Impact factor: 3.575

2.  Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damage.

Authors:  Hengbin Wang; Ling Zhai; Jun Xu; Heui-Yun Joo; Sarah Jackson; Hediye Erdjument-Bromage; Paul Tempst; Yue Xiong; Yi Zhang
Journal:  Mol Cell       Date:  2006-05-05       Impact factor: 17.970

Review 3.  Contending with transcriptional arrest during RNAPII transcript elongation.

Authors:  Jesper Q Svejstrup
Journal:  Trends Biochem Sci       Date:  2007-03-08       Impact factor: 13.807

4.  Rapid and prolonged stalling of human DNA topoisomerase I in UVA-irradiated genomic areas.

Authors:  Christian Mielke; Faiza M Kalfalah; Morten O Christensen; Fritz Boege
Journal:  DNA Repair (Amst)       Date:  2007-08-31

5.  The involvement of poly(ADP-ribose) polymerase in the oxidative stress responses in plants.

Authors:  Y Amor; E Babiychuk; D Inzé; A Levine
Journal:  FEBS Lett       Date:  1998-11-27       Impact factor: 4.124

6.  Seed imbibition in Medicago truncatula Gaertn.: Expression profiles of DNA repair genes in relation to PEG-mediated stress.

Authors:  Alma Balestrazzi; Massimo Confalonieri; Anca Macovei; Daniela Carbonera
Journal:  J Plant Physiol       Date:  2010-12-03       Impact factor: 3.549

7.  A comparison of two DNA base excision repair glycosylases from Arabidopsis thaliana.

Authors:  Terence M Murphy; Adia George
Journal:  Biochem Biophys Res Commun       Date:  2005-04-15       Impact factor: 3.575

8.  Arabidopsis UVH6, a homolog of human XPD and yeast RAD3 DNA repair genes, functions in DNA repair and is essential for plant growth.

Authors:  Zongrang Liu; Suk-Whan Hong; Mindy Escobar; Elizabeth Vierling; David L Mitchell; David W Mount; Jennifer D Hall
Journal:  Plant Physiol       Date:  2003-07       Impact factor: 8.340

Review 9.  Repair and tolerance of oxidative DNA damage in plants.

Authors:  Teresa Roldán-Arjona; Rafael R Ariza
Journal:  Mutat Res       Date:  2008-07-29       Impact factor: 2.433

Review 10.  Genotoxic stress in plants: shedding light on DNA damage, repair and DNA repair helicases.

Authors:  Narendra Tuteja; Parvaiz Ahmad; Brahma B Panda; Renu Tuteja
Journal:  Mutat Res       Date:  2008-07-03       Impact factor: 2.433

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  32 in total

1.  Plant biotechnology in support of the Millennium Goals.

Authors:  Günther Hahne; Michael Horn; Ralf Reski
Journal:  Plant Cell Rep       Date:  2011-03       Impact factor: 4.570

Review 2.  Seed priming: state of the art and new perspectives.

Authors:  S Paparella; S S Araújo; G Rossi; M Wijayasinghe; D Carbonera; Alma Balestrazzi
Journal:  Plant Cell Rep       Date:  2015-03-27       Impact factor: 4.570

Review 3.  DNA Damage Repair in the Context of Plant Chromatin.

Authors:  Mattia Donà; Ortrun Mittelsten Scheid
Journal:  Plant Physiol       Date:  2015-06-18       Impact factor: 8.340

Review 4.  Systems biology and genome-wide approaches to unveil the molecular players involved in the pre-germinative metabolism: implications on seed technology traits.

Authors:  Anca Macovei; Andrea Pagano; Paola Leonetti; Daniela Carbonera; Alma Balestrazzi; Susana S Araújo
Journal:  Plant Cell Rep       Date:  2016-10-11       Impact factor: 4.570

Review 5.  Systems biology of seeds: decoding the secret of biochemical seed factories for nutritional security.

Authors:  Anil Kumar; Rajesh Kumar Pathak; Aranyadip Gayen; Supriya Gupta; Manoj Singh; Charu Lata; Himanshu Sharma; Joy Kumar Roy; Sanjay Mohan Gupta
Journal:  3 Biotech       Date:  2018-10-24       Impact factor: 2.406

6.  Copper-mediated genotoxic stress is attenuated by the overexpression of the DNA repair gene MtTdp2α (tyrosyl-DNA phosphodiesterase 2) in Medicago truncatula plants.

Authors:  Matteo Faè; Alma Balestrazzi; Massimo Confalonieri; Mattia Donà; Anca Macovei; Alberto Valassi; Giorgio Giraffa; Daniela Carbonera
Journal:  Plant Cell Rep       Date:  2014-03-18       Impact factor: 4.570

7.  DNA profiling, telomere analysis and antioxidant properties as tools for monitoring ex situ seed longevity.

Authors:  M Donà; A Balestrazzi; A Mondoni; G Rossi; L Ventura; A Buttafava; A Macovei; M E Sabatini; A Valassi; D Carbonera
Journal:  Ann Bot       Date:  2013-03-26       Impact factor: 4.357

Review 8.  microRNAs as promising tools for improving stress tolerance in rice.

Authors:  Anca Macovei; Sarvajeet Singh Gill; Narendra Tuteja
Journal:  Plant Signal Behav       Date:  2012-08-20

9.  Gene networks and chromatin and transcriptional regulation of the phaseolin promoter in Arabidopsis.

Authors:  Sabarinath Sundaram; Sunee Kertbundit; Eugene V Shakirov; Lakshminarayan M Iyer; Miloslav Jurícek; Timothy C Hall
Journal:  Plant Cell       Date:  2013-07-19       Impact factor: 11.277

10.  An alternative telomerase RNA in Arabidopsis modulates enzyme activity in response to DNA damage.

Authors:  Catherine Cifuentes-Rojas; Andrew D L Nelson; Kara A Boltz; Kalpana Kannan; Xintao She; Dorothy E Shippen
Journal:  Genes Dev       Date:  2012-10-29       Impact factor: 11.361

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