Literature DB >> 11355413

Less is more--length reduction of STR amplicons using redesigned primers.

P Wiegand1, M Kleiber.   

Abstract

PCR primers closely flanking the repeat region were redesigned to reduce the amplicon length of the selected STRs down to approximately 100 bp for the shorter alleles (loci HumTH01, D10S2325, DYS19 and DYS391). Highly degraded DNA (e.g. formalin-fixed tissue) and very low amounts of DNA could be more successfully typed using the new redesigned primers compared to the established sequences generating longer amplicons.

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Year:  2001        PMID: 11355413     DOI: 10.1007/s004140000162

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  23 in total

1.  Development of a 13-locus PCR multiplex system for paternity testing.

Authors:  J Schlenk; S Seidl; G Braunschweiger; P Betz; T Lederer
Journal:  Int J Legal Med       Date:  2004-01-14       Impact factor: 2.686

2.  Application of thiopropyl sepharose 6B for removal of PCR inhibitors from DNA extracts of a thigh bone recovered from the sea.

Authors:  Erik Sørensen; Steen Holger Hansen; Birthe Eriksen; Niels Morling
Journal:  Int J Legal Med       Date:  2003-06-19       Impact factor: 2.686

3.  Duplication of DYS19 flanking regions in other parts of the Y chromosome.

Authors:  John M Butler; Richard Schoske
Journal:  Int J Legal Med       Date:  2004-04-07       Impact factor: 2.686

4.  Short amplicon STR multiplex for stain typing.

Authors:  P Wiegand; R Klein; G Braunschweiger; C Hohoff; B Brinkmann
Journal:  Int J Legal Med       Date:  2005-11-08       Impact factor: 2.686

5.  Forensic identification of urine samples: a comparison between nuclear and mitochondrial DNA markers.

Authors:  V Castella; N Dimo-Simonin; C Brandt-Casadevall; N Robinson; M Saugy; F Taroni; P Mangin
Journal:  Int J Legal Med       Date:  2005-08-30       Impact factor: 2.686

6.  A new "miniSTR-multiplex" displaying reduced amplicon lengths for the analysis of degraded DNA.

Authors:  P Grubwieser; R Mühlmann; B Berger; H Niederstätter; M Pavlic; W Parson
Journal:  Int J Legal Med       Date:  2005-07-13       Impact factor: 2.686

7.  Allele frequencies of the six miniSTR loci in a population from Japan.

Authors:  H Asamura; R Uchida; K Takayanagi; M Ota; H Fukushima
Journal:  Int J Legal Med       Date:  2005-07-13       Impact factor: 2.686

8.  Y-STR analysis of degraded DNA using reduced-size amplicons.

Authors:  Myung Jin Park; Hwan Young Lee; Ukhee Chung; Seung-Chul Kang; Kyoung-Jin Shin
Journal:  Int J Legal Med       Date:  2006-11-15       Impact factor: 2.686

9.  First successful assay of Y-SNP typing by SNaPshot minisequencing on ancient DNA.

Authors:  C Bouakaze; C Keyser; S Amory; E Crubézy; B Ludes
Journal:  Int J Legal Med       Date:  2007-05-30       Impact factor: 2.686

10.  Evaluation of miniY-STR multiplex PCR systems for extended 16 Y-STR loci.

Authors:  H Asamura; S Fujimori; M Ota; T Oki; H Fukushima
Journal:  Int J Legal Med       Date:  2007-09-26       Impact factor: 2.686

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