Literature DB >> 15965763

Characterisation of variant alleles in the STR systems D2S1338, D3S1358 and D19S433.

Marielle Heinrich1, Heike Felske-Zech, Bernd Brinkmann, Carsten Hohoff.   

Abstract

We have observed three hitherto undescribed off-ladder alleles at three widely used STR loci. These were isolated, sequenced and designated as follows: allele 10 (D2S1338, one case), allele 21 (D3S1358, two cases) and allele 6.2 (D19S433, six cases). These sequences are described in comparison to non-variant alleles, and their implications for the semi-automated STR analysis will be discussed.

Mesh：

Year:  2005        PMID： 15965763     DOI： 10.1007/s00414-005-0554-8

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN： 0937-9827            Impact factor:   2.686


  12 in total

1.  Validation of the AMPFlSTR SGM plus system for use in forensic casework.

Authors:  E A Cotton; R F Allsop; J L Guest; R R Frazier; P Koumi; I P Callow; A Seager; R L Sparkes
Journal:  Forensic Sci Int       Date:  2000-08-14       Impact factor: 2.395

2.  A very long ACTBP2 (SE33) allele.

Authors:  R Klein; G Braunschweiger; A Junge; P Wiegand
Journal:  Int J Legal Med       Date:  2003-05-29       Impact factor: 2.686

3.  Development of a 13-locus PCR multiplex system for paternity testing.

Authors:  J Schlenk; S Seidl; G Braunschweiger; P Betz; T Lederer
Journal:  Int J Legal Med       Date:  2004-01-14       Impact factor: 2.686

4.  Identification of DYS385 allele variants by using shorter amplicons and Northern Thai haplotype data.

Authors:  Tanin Bhoopat; Carsten Hohoff; Heinrich F Steger
Journal:  J Forensic Sci       Date:  2003-09       Impact factor: 1.832

5.  Development of the AmpFISTR SEfiler PCR amplification kit: a new multiplex containing the highly discriminating ACTBP2 (SE33) locus.

Authors:  Sulekha Rao Coticone; Nicola Oldroyd; Heidi Philips; Paul Foxall
Journal:  Int J Legal Med       Date:  2004-05-15       Impact factor: 2.686

6.  Allelic drop-out in the STR system ACTBP2 (SE33) as a result of mutations in the primer binding region.

Authors:  Marielle Heinrich; Miriam Müller; Steven Rand; Bernd Brinkmann; Carsten Hohoff
Journal:  Int J Legal Med       Date:  2004-08-20       Impact factor: 2.686

7.  Unusual variant alleles in commonly used short tandem repeat loci.

Authors:  P Grubwieser; R Mühlmann; H Niederstätter; M Pavlic; W Parson
Journal:  Int J Legal Med       Date:  2005-01-05       Impact factor: 2.686

8.  New sensitive amplification primers for the STR locus D2S1338 for degraded casework DNA.

Authors:  P Grubwieser; R Mühlmann; W Parson
Journal:  Int J Legal Med       Date:  2003-02-11       Impact factor: 2.686

9.  Sequence variation in humans and other primates at six short tandem repeat loci used in forensic identity testing.

Authors:  K Lazaruk; J Wallin; C Holt; T Nguyen; P S Walsh
Journal:  Forensic Sci Int       Date:  2001-06-01       Impact factor: 2.395

10.  D3S1358: sequence analysis and gene frequency in a German population.

Authors:  E Mornhinweg; C Luckenbach; R Fimmers; H Ritter; E Momhinweg
Journal:  Forensic Sci Int       Date:  1998-07-20       Impact factor: 2.395
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  7 in total

1.  Meiosis study in a population sample from Afghanistan: allele frequencies and mutation rates of 16 STR loci.

Authors:  Carsten Hohoff; Marianne Schürenkamp; Torsten Börchers; Marjon Eppink; Bernd Brinkmann
Journal:  Int J Legal Med       Date:  2006-07-13       Impact factor: 2.686

2.  Variant alleles, triallelic patterns, and point mutations observed in nuclear short tandem repeat typing of populations in Bosnia and Serbia.

Authors:  René L M Huel; Lara Basić; Kamelija Madacki-Todorović; Lejla Smajlović; Izet Eminović; Irfan Berbić; Ana Milos; Thomas J Parsons
Journal:  Croat Med J       Date:  2007-08       Impact factor: 1.351

3.  Characterization of two unusual allele variants at the STR locus ACTBP2 (SE33).

Authors:  Thomas Lederer; Günther Braunschweiger; Bettina Dunkelmann; Peter Betz
Journal:  Forensic Sci Med Pathol       Date:  2008-01-05       Impact factor: 2.007

4.  Meiosis study in a population sample from Nigeria: allele frequencies and mutation rates of 16 STR loci.

Authors:  Carsten Hohoff; Marianne Schürenkamp; Bernd Brinkmann
Journal:  Int J Legal Med       Date:  2009-01-21       Impact factor: 2.686

5.  Identification and sequence analysis of discordant phenotypes between AmpFlSTR SGM Plus and PowerPlex 16.

Authors:  Nancy Vanderheyden; Ahnly Mai; Anja Gilissen; Jean-Jacques Cassiman; Ronny Decorte
Journal:  Int J Legal Med       Date:  2007-04-04       Impact factor: 2.791

6.  Elevated germline mutation rate in teenage fathers.

Authors:  Peter Forster; Carsten Hohoff; Bettina Dunkelmann; Marianne Schürenkamp; Heidi Pfeiffer; Franz Neuhuber; Bernd Brinkmann
Journal:  Proc Biol Sci       Date:  2015-03-22       Impact factor: 5.349

7.  Flanking Variation Influences Rates of Stutter in Simple Repeats.

Authors:  August E Woerner; Jonathan L King; Bruce Budowle
Journal:  Genes (Basel)       Date:  2017-11-17       Impact factor: 4.096
  7 in total

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