Literature DB >> 12649499

Identification of novel components of Trypanosoma brucei editosomes.

Aswini K Panigrahi1, Achim Schnaufer, Nancy L Ernst, Bingbing Wang, Nicole Carmean, Reza Salavati, Kenneth Stuart.   

Abstract

The editosome is a multiprotein complex that catalyzes the insertion and deletion of uridylates that occurs during RNA editing in trypanosomatids. We report the identification of nine novel editosome proteins in Trypanosoma brucei. They were identified by mass spectrometric analysis of functional editosomes that were purified by serial ion exchange/gel permeation chromatography, immunoaffinity chromatography specific to the TbMP63 editosome protein, or tandem affinity purification based on a tagged RNA editing ligase. The newly identified proteins have ribonuclease and/or RNA binding motifs suggesting nuclease function for at least some of these. Five of the proteins are interrelated, as are two others, and one is related to four previously identified editosome proteins. The implications of these findings are discussed.

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Year:  2003        PMID: 12649499      PMCID: PMC1370414          DOI: 10.1261/rna.2194603

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  33 in total

1.  Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein.

Authors:  Catherine E Huang; Sean F O'Hearn; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

2.  Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes.

Authors:  Jorge Cruz-Reyes; Alevtina G Zhelonkina; Catherine E Huang; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

Review 3.  RNA editing: complexity and complications.

Authors:  Kenneth Stuart; Aswini K Panigrahi
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

4.  Addition of uridines to edited RNAs in trypanosome mitochondria occurs independently of transcription.

Authors:  M E Harris; D R Moore; S L Hajduk
Journal:  J Biol Chem       Date:  1990-07-05       Impact factor: 5.157

5.  RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing.

Authors:  R Sabatini; S L Hajduk
Journal:  J Biol Chem       Date:  1995-03-31       Impact factor: 5.157

6.  Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties.

Authors:  R A Corell; L K Read; G R Riley; J K Nellissery; T E Allen; M L Kable; M D Wachal; S D Seiwert; P J Myler; K D Stuart
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

7.  Trypanosoma brucei gBP21. An arginine-rich mitochondrial protein that binds to guide RNA with high affinity.

Authors:  J Köller; U F Müller; B Schmid; A Missel; V Kruft; K Stuart; H U Göringer
Journal:  J Biol Chem       Date:  1997-02-07       Impact factor: 5.157

8.  Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing.

Authors:  S D Seiwert; S Heidmann; K Stuart
Journal:  Cell       Date:  1996-03-22       Impact factor: 41.582

9.  Trypanosoma brucei mitochondrial guide RNA-mRNA chimera-forming activity cofractionates with an editing-domain-specific endonuclease and RNA ligase and is mimicked by heterologous nuclease and RNA ligase.

Authors:  K J Piller; C J Decker; L N Rusché; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  1995-06       Impact factor: 4.272

10.  Native mRNA editing complexes from Trypanosoma brucei mitochondria.

Authors:  V W Pollard; M E Harris; S L Hajduk
Journal:  EMBO J       Date:  1992-12       Impact factor: 11.598

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  87 in total

1.  Protein translocase of mitochondrial inner membrane in Trypanosoma brucei.

Authors:  Ujjal K Singha; Vanae Hamilton; Melanie R Duncan; Ebony Weems; Manish K Tripathi; Minu Chaudhuri
Journal:  J Biol Chem       Date:  2012-03-09       Impact factor: 5.157

2.  Comparative analysis of editosome proteins in trypanosomatids.

Authors:  Elizabeth A Worthey; Achim Schnaufer; I Saira Mian; Kenneth Stuart; Reza Salavati
Journal:  Nucleic Acids Res       Date:  2003-11-15       Impact factor: 16.971

Review 3.  Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing.

Authors:  Larry Simpson; Ruslan Aphasizhev; Guanghan Gao; Xuedong Kang
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

4.  Two distinct roles for terminal uridylyl transferases in RNA editing.

Authors:  Jonatha M Gott
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-08       Impact factor: 11.205

5.  Differential Editosome Protein Function between Life Cycle Stages of Trypanosoma brucei.

Authors:  Suzanne M McDermott; Xuemin Guo; Jason Carnes; Kenneth Stuart
Journal:  J Biol Chem       Date:  2015-08-24       Impact factor: 5.157

6.  In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle.

Authors:  Julie A Law; Catherine E Huang; Sean F O'Hearn; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

7.  Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei.

Authors:  Junpeng Deng; Nancy Lewis Ernst; Stewart Turley; Kenneth D Stuart; Wim G J Hol
Journal:  EMBO J       Date:  2005-11-10       Impact factor: 11.598

Review 8.  Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates.

Authors:  Julius Lukes; Hassan Hashimi; Alena Zíková
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

9.  The 3'-untranslated region of cytochrome oxidase II mRNA functions in RNA editing of African trypanosomes exclusively as a cis guide RNA.

Authors:  Daniel E Golden; Stephen L Hajduk
Journal:  RNA       Date:  2004-12-01       Impact factor: 4.942

10.  Mass spectrometric analysis of the editosome and other multiprotein complexes in Trypanosoma brucei.

Authors:  Aswini K Panigrahi; Thomas E Allen; Kenneth Stuart; Paul A Haynes; Steven P Gygi
Journal:  J Am Soc Mass Spectrom       Date:  2003-07       Impact factor: 3.109

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