Literature DB >> 12574127

Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria.

Ruslan Aphasizhev1, Inna Aphasizheva, Robert E Nelson, Guanghan Gao, Agda M Simpson, Xuedong Kang, Arnold M Falick, Sandro Sbicego, Larry Simpson.   

Abstract

A multiprotein, high molecular weight complex active in both U-insertion and U-deletion as judged by a pre-cleaved RNA editing assay was isolated from mitochondrial extracts of Leishmania tarentolae by the tandem affinity purification (TAP) procedure, using three different TAP-tagged proteins of the complex. This editing- or E-complex consists of at least three protein-containing components interacting via RNA: the RNA ligase-containing L-complex, a 3' TUTase (terminal uridylyltransferase) and two RNA-binding proteins, Ltp26 and Ltp28. Thirteen approximately stoichiometric components were identified by mass spectrometric analysis of the core L-complex: two RNA ligases; homologs of the four Trypanosoma brucei editing proteins; and seven novel polypeptides, among which were two with RNase III, one with an AP endo/exonuclease and one with nucleotidyltransferase motifs. Three proteins have no similarities beyond kinetoplastids.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12574127      PMCID: PMC145443          DOI: 10.1093/emboj/cdg083

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  34 in total

1.  Guide RNAs in kinetoplastid mitochondria have a nonencoded 3' oligo(U) tail involved in recognition of the preedited region.

Authors:  B Blum; L Simpson
Journal:  Cell       Date:  1990-07-27       Impact factor: 41.582

2.  RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing.

Authors:  R Sabatini; S L Hajduk
Journal:  J Biol Chem       Date:  1995-03-31       Impact factor: 5.157

3.  Trypanosome U-deletional RNA editing involves guide RNA-directed endonuclease cleavage, terminal U exonuclease, and RNA ligase activities.

Authors:  J Cruz-Reyes; B Sollner-Webb
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-20       Impact factor: 11.205

4.  T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage.

Authors:  J Cruz-Reyes; L N Rusché; K J Piller; B Sollner-Webb
Journal:  Mol Cell       Date:  1998-02       Impact factor: 17.970

5.  Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria.

Authors:  L N Rusché; J Cruz-Reyes; K J Piller; B Sollner-Webb
Journal:  EMBO J       Date:  1997-07-01       Impact factor: 11.598

6.  Guide RNA-directed uridine insertion RNA editing in vitro.

Authors:  E M Byrne; G J Connell; L Simpson
Journal:  EMBO J       Date:  1996-12-02       Impact factor: 11.598

7.  Native gel analysis of ribonucleoprotein complexes from a Leishmania tarentolae mitochondrial extract.

Authors:  M Peris; A M Simpson; J Grunstein; J E Liliental; G C Frech; L Simpson
Journal:  Mol Biochem Parasitol       Date:  1997-03       Impact factor: 1.759

8.  Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing.

Authors:  S D Seiwert; S Heidmann; K Stuart
Journal:  Cell       Date:  1996-03-22       Impact factor: 41.582

9.  Modification of Trypanosoma brucei mitochondrial rRNA by posttranscriptional 3' polyuridine tail formation.

Authors:  B K Adler; M E Harris; K I Bertrand; S L Hajduk
Journal:  Mol Cell Biol       Date:  1991-12       Impact factor: 4.272

10.  Development of a stable Leishmania expression vector and application to the study of parasite surface antigen genes.

Authors:  J H LeBowitz; C M Coburn; D McMahon-Pratt; S M Beverley
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12       Impact factor: 11.205

View more
  76 in total

1.  Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential.

Authors:  Sean F O'Hearn; Catherine E Huang; Mike Hemann; Alevtina Zhelonkina; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

2.  Comparative analysis of editosome proteins in trypanosomatids.

Authors:  Elizabeth A Worthey; Achim Schnaufer; I Saira Mian; Kenneth Stuart; Reza Salavati
Journal:  Nucleic Acids Res       Date:  2003-11-15       Impact factor: 16.971

Review 3.  Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing.

Authors:  Larry Simpson; Ruslan Aphasizhev; Guanghan Gao; Xuedong Kang
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

4.  Two distinct roles for terminal uridylyl transferases in RNA editing.

Authors:  Jonatha M Gott
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-08       Impact factor: 11.205

5.  Analysis of spliceosomal proteins in Trypanosomatids reveals novel functions in mRNA processing.

Authors:  Itai Dov Tkacz; Sachin Kumar Gupta; Vadim Volkov; Mali Romano; Tomer Haham; Pawel Tulinski; Ilana Lebenthal; Shulamit Michaeli
Journal:  J Biol Chem       Date:  2010-06-30       Impact factor: 5.157

Review 6.  When you can't trust the DNA: RNA editing changes transcript sequences.

Authors:  Volker Knoop
Journal:  Cell Mol Life Sci       Date:  2010-10-12       Impact factor: 9.261

7.  In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle.

Authors:  Julie A Law; Catherine E Huang; Sean F O'Hearn; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

8.  Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei.

Authors:  Junpeng Deng; Nancy Lewis Ernst; Stewart Turley; Kenneth D Stuart; Wim G J Hol
Journal:  EMBO J       Date:  2005-11-10       Impact factor: 11.598

Review 9.  Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates.

Authors:  Julius Lukes; Hassan Hashimi; Alena Zíková
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

10.  Guide RNA-binding complex from mitochondria of trypanosomatids.

Authors:  James Weng; Inna Aphasizheva; Ronald D Etheridge; Lan Huang; Xiaorong Wang; Arnold M Falick; Ruslan Aphasizhev
Journal:  Mol Cell       Date:  2008-10-24       Impact factor: 17.970

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.