Literature DB >> 12526802

Shifty ciliates: frequent programmed translational frameshifting in euplotids.

Lawrence A Klobutcher1, Philip J Farabaugh.   

Abstract

Recent work suggests that there is a high frequency of programmed +1 translational frameshifting in ciliates of the Euplotes genus. Frequent frameshifting may have been potentiated by stop codon reassignment, which is also a feature of this group.

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Year:  2002        PMID： 12526802     DOI： 10.1016/s0092-8674(02)01138-8

Source DB:  PubMed          Journal:  Cell        ISSN： 0092-8674            Impact factor:   41.582


  30 in total

1.  A programmed -1 ribosomal frameshift signal can function as a cis-acting mRNA destabilizing element.

Authors:  Ewan P Plant; Pinger Wang; Jonathan L Jacobs; Jonathan D Dinman
Journal:  Nucleic Acids Res       Date:  2004-02-03       Impact factor: 16.971

2.  Evolution of programmed ribosomal frameshifting in the TERT genes of Euplotes.

Authors:  Matthias Möllenbeck; Michael C Gavin; Lawrence A Klobutcher
Journal:  J Mol Evol       Date:  2004-06       Impact factor: 2.395

Review 3.  Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning.

Authors:  Pavel V Baranov; John F Atkins; Martina M Yordanova
Journal:  Nat Rev Genet       Date:  2015-08-11       Impact factor: 53.242

4.  Identification of programmed translational -1 frameshifting sites in the genome of Saccharomyces cerevisiae.

Authors:  Michaël Bekaert; Hugues Richard; Bernard Prum; Jean-Pierre Rousset
Journal:  Genome Res       Date:  2005-10       Impact factor: 9.043

5.  Evolutionary specialization of recoding: frameshifting in the expression of S. cerevisiae antizyme mRNA is via an atypical antizyme shift site but is still +1.

Authors:  Ivaylo P Ivanov; Raymond F Gesteland; John F Atkins
Journal:  RNA       Date:  2006-01-23       Impact factor: 4.942

6.  Programmed Ribosomal Frameshifting Goes Beyond Viruses: Organisms from all three kingdoms use frameshifting to regulate gene expression, perhaps signaling a paradigm shift.

Authors:  Jonathan D Dinman
Journal:  Microbe Wash DC       Date:  2006-11

Review 7.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

8.  Certain non-standard coding tables appear to be more robust to error than the standard genetic code.

Authors:  Mehmet Levent Kurnaz; Tugce Bilgin; Isil Aksan Kurnaz
Journal:  J Mol Evol       Date:  2009-12-10       Impact factor: 2.395

Review 9.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

Authors:  John F Atkins; Gary Loughran; Pramod R Bhatt; Andrew E Firth; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

10.  Coding properties of Oxytricha trifallax (Sterkiella histriomuscorum) macronuclear chromosomes: analysis of a pilot genome project.

Authors:  Andre R O Cavalcanti; Nicholas A Stover; Lorenzo Orecchia; Thomas G Doak; Laura F Landweber
Journal:  Chromosoma       Date:  2004-07-16       Impact factor: 4.316
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