Literature DB >> 15461427

Evolution of programmed ribosomal frameshifting in the TERT genes of Euplotes.

Matthias Möllenbeck1, Michael C Gavin, Lawrence A Klobutcher.   

Abstract

A number of recent studies indicate that programmed + 1 ribosomal frameshifting is frequently required for the expression of genes in species of the genus Euplotes. In E. crassus, three genes encoding the telomerase reverse transcriptase (TERT) subunit have been previously found to possess one or two + 1 frameshift sites. To examine the origin of frameshift sites within the Euplotes group, we have isolated segments of the TERT gene from five Euplotes species. Coupled with phylogenetic analysis, the results indicate that one frameshift site in the TERT gene arose late in the evolution of the group. In addition, a novel frameshift site was identified in the TERT gene of E. minuta, a species where frameshifting has not been previously reported. Coupled with other studies, the results indicate that frameshift sites have arisen during the diversification of the euplotids. The results also are discussed in regard to the mutations necessary to generate frameshift sites, and the specialization of TERT protein function that has apparently occurred in E. crassus.

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Year:  2004        PMID: 15461427     DOI: 10.1007/s00239-004-2592-0

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  31 in total

1.  Programmed translational frameshifting is likely required for expressions of genes encoding putative nuclear protein kinases of the ciliate Euplotes octocarinatus.

Authors:  M Tan; A Liang; C Brünen-Nieweler; K Heckmann
Journal:  J Eukaryot Microbiol       Date:  2001 Sep-Oct       Impact factor: 3.346

2.  Phylogenetic relationships within the class Spirotrichea (Ciliophora) inferred from small subunit rRNA gene sequences.

Authors:  D Bernhard; A Stechmann; W Foissner; D Ammermann; M Hehn; M Schlegel
Journal:  Mol Phylogenet Evol       Date:  2001-10       Impact factor: 4.286

Review 3.  Shifty ciliates: frequent programmed translational frameshifting in euplotids.

Authors:  Lawrence A Klobutcher; Philip J Farabaugh
Journal:  Cell       Date:  2002-12-13       Impact factor: 41.582

4.  Differential DNA amplification and copy number control in the hypotrichous ciliate Euplotes crassus.

Authors:  S E Baird; L A Klobutcher
Journal:  J Protozool       Date:  1991 Mar-Apr

Review 5.  Translational frameshifting in the control of transposition in bacteria.

Authors:  M Chandler; O Fayet
Journal:  Mol Microbiol       Date:  1993-02       Impact factor: 3.501

6.  MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers.

Authors:  S Kumar; K Tamura; M Nei
Journal:  Comput Appl Biosci       Date:  1994-04

7.  Euplotes telomerase contains an La motif protein produced by apparent translational frameshifting.

Authors:  S Aigner; J Lingner; K J Goodrich; C A Grosshans; A Shevchenko; M Mann; T R Cech
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

8.  Reverse transcriptase motifs in the catalytic subunit of telomerase.

Authors:  J Lingner; T R Hughes; A Shevchenko; M Mann; V Lundblad; T R Cech
Journal:  Science       Date:  1997-04-25       Impact factor: 47.728

9.  Developmentally programmed gene elimination in Euplotes crassus facilitates a switch in the telomerase catalytic subunit.

Authors:  Zemfira Karamysheva; Libin Wang; Timothy Shrode; Janna Bednenko; Leigh Anne Hurley; Dorothy E Shippen
Journal:  Cell       Date:  2003-05-30       Impact factor: 41.582

10.  Genetic code deviations in the ciliates: evidence for multiple and independent events.

Authors:  A B Tourancheau; N Tsao; L A Klobutcher; R E Pearlman; A Adoutte
Journal:  EMBO J       Date:  1995-07-03       Impact factor: 11.598

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  5 in total

Review 1.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

Authors:  John F Atkins; Gary Loughran; Pramod R Bhatt; Andrew E Firth; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

2.  Sequencing of random Euplotes crassus macronuclear genes supports a high frequency of +1 translational frameshifting.

Authors:  Lawrence A Klobutcher
Journal:  Eukaryot Cell       Date:  2005-12

3.  Large-scale mass spectrometry-based analysis of Euplotes octocarinatus supports the high frequency of +1 programmed ribosomal frameshift.

Authors:  Ruanlin Wang; Zhiyun Zhang; Jun Du; Yuejun Fu; Aihua Liang
Journal:  Sci Rep       Date:  2016-09-06       Impact factor: 4.379

4.  High frequency of +1 programmed ribosomal frameshifting in Euplotes octocarinatus.

Authors:  Ruanlin Wang; Jie Xiong; Wei Wang; Wei Miao; Aihua Liang
Journal:  Sci Rep       Date:  2016-02-19       Impact factor: 4.379

Review 5.  Control of gene expression by translational recoding.

Authors:  Jonathan D Dinman
Journal:  Adv Protein Chem Struct Biol       Date:  2012       Impact factor: 3.507

  5 in total

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