Literature DB >> 17541450

Programmed Ribosomal Frameshifting Goes Beyond Viruses: Organisms from all three kingdoms use frameshifting to regulate gene expression, perhaps signaling a paradigm shift.

Jonathan D Dinman1.   

Abstract

Year:  2006        PMID： 17541450      PMCID： PMC1885200          DOI： 10.1128/microbe.1.521.1

Source DB:  PubMed          Journal:  Microbe Wash DC        ISSN： 1558-7452


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  9 in total

Review 1.  Recoding: translational bifurcations in gene expression.

Authors:  Pavel V Baranov; Raymond F Gesteland; John F Atkins
Journal:  Gene       Date:  2002-03-20       Impact factor: 3.688

2.  A programmed -1 ribosomal frameshift signal can function as a cis-acting mRNA destabilizing element.

Authors:  Ewan P Plant; Pinger Wang; Jonathan L Jacobs; Jonathan D Dinman
Journal:  Nucleic Acids Res       Date:  2004-02-03       Impact factor: 16.971

Review 3.  Shifty ciliates: frequent programmed translational frameshifting in euplotids.

Authors:  Lawrence A Klobutcher; Philip J Farabaugh
Journal:  Cell       Date:  2002-12-13       Impact factor: 41.582

Review 4.  The 9-A solution: how mRNA pseudoknots promote efficient programmed -1 ribosomal frameshifting.

Authors:  Ewan P Plant; Kristi L Muldoon Jacobs; Jason W Harger; Arturas Meskauskas; Jonathan L Jacobs; Jennifer L Baxter; Alexey N Petrov; Jonathan D Dinman
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

Review 5.  Recoding in archaea.

Authors:  Beatrice Cobucci-Ponzano; Mosè Rossi; Marco Moracci
Journal:  Mol Microbiol       Date:  2005-01       Impact factor: 3.501

6.  Identification of putative programmed -1 ribosomal frameshift signals in large DNA databases.

Authors:  A B Hammell; R C Taylor; S W Peltz; J D Dinman
Journal:  Genome Res       Date:  1999-05       Impact factor: 9.043

Review 7.  Reprogrammed genetic decoding in cellular gene expression.

Authors:  Olivier Namy; Jean-Pierre Rousset; Sawsan Napthine; Ian Brierley
Journal:  Mol Cell       Date:  2004-01-30       Impact factor: 17.970

8.  Identification of functional, endogenous programmed -1 ribosomal frameshift signals in the genome of Saccharomyces cerevisiae.

Authors:  Jonathan L Jacobs; Ashton T Belew; Rasa Rakauskaite; Jonathan D Dinman
Journal:  Nucleic Acids Res       Date:  2006-12-07       Impact factor: 16.971

9.  Torsional restraint: a new twist on frameshifting pseudoknots.

Authors:  Ewan P Plant; Jonathan D Dinman
Journal:  Nucleic Acids Res       Date:  2005-03-30       Impact factor: 16.971
  9 in total
  20 in total

1.  A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment.

Authors:  Virag Sharma; Andrew E Firth; Ivan Antonov; Olivier Fayet; John F Atkins; Mark Borodovsky; Pavel V Baranov
Journal:  Mol Biol Evol       Date:  2011-06-14       Impact factor: 16.240

2.  The central core region of yeast ribosomal protein L11 is important for subunit joining and translational fidelity.

Authors:  Michael H J Rhodin; Rasa Rakauskaitė; Jonathan D Dinman
Journal:  Mol Genet Genomics       Date:  2011-04-26       Impact factor: 3.291

3.  A conserved eEF2 coding variant in SCA26 leads to loss of translational fidelity and increased susceptibility to proteostatic insult.

Authors:  Katherine E Hekman; Guo-Yun Yu; Christopher D Brown; Haipeng Zhu; Xiaofei Du; Kristina Gervin; Dag Erik Undlien; April Peterson; Giovanni Stevanin; H Brent Clark; Stefan M Pulst; Thomas D Bird; Kevin P White; Christopher M Gomez
Journal:  Hum Mol Genet       Date:  2012-09-21       Impact factor: 6.150

4.  Limitations of the 'ambush hypothesis' at the single-gene scale: what codon biases are to blame?

Authors:  Robert L Bertrand; Mona Abdel-Hameed; John L Sorensen
Journal:  Mol Genet Genomics       Date:  2014-10-12       Impact factor: 3.291

5.  Ablation of Programmed -1 Ribosomal Frameshifting in Venezuelan Equine Encephalitis Virus Results in Attenuated Neuropathogenicity.

Authors:  Joseph A Kendra; Cynthia de la Fuente; Ashwini Brahms; Caitlin Woodson; Todd M Bell; Bin Chen; Yousuf A Khan; Jonathan L Jacobs; Kylene Kehn-Hall; Jonathan D Dinman
Journal:  J Virol       Date:  2017-01-18       Impact factor: 5.103

Review 6.  Regulators of Viral Frameshifting: More Than RNA Influences Translation Events.

Authors:  Wesley D Penn; Haley R Harrington; Jonathan P Schlebach; Suchetana Mukhopadhyay
Journal:  Annu Rev Virol       Date:  2020-06-29       Impact factor: 10.431

7.  Structural and catalytic roles of the human 18S rRNA methyltransferases DIMT1 in ribosome assembly and translation.

Authors:  Hui Shen; Julian Stoute; Kathy Fange Liu
Journal:  J Biol Chem       Date:  2020-07-02       Impact factor: 5.157

8.  Immunohistochemical detection of the pro-apoptotic Bax∆2 protein in human tissues.

Authors:  Adriana Mañas; Qi Yao; Aislinn Davis; Sana Basheer; Evan Beatty; Honghong Zhang; Jiajun Li; Adam Nelson; Huaiyuan Zhang; Jialing Xiang
Journal:  Histochem Cell Biol       Date:  2020-03-21       Impact factor: 4.304

9.  Forcing the ribosome to change its message.

Authors:  Sarah E Leininger; Carol Deutsch; Edward P O'Brien
Journal:  J Biol Chem       Date:  2020-05-15       Impact factor: 5.157

10.  Recode-2: new design, new search tools, and many more genes.

Authors:  Michaël Bekaert; Andrew E Firth; Yan Zhang; Vadim N Gladyshev; John F Atkins; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2009-09-25       Impact factor: 16.971
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