Literature DB >> 12440693

Molecular basis of voltage gating of OmpF porin.

Kindal M Robertson1, D Peter Tieleman.   

Abstract

OmpF and PhoE from Escherichia coli and related homologous proteins from other Gram-negative bacteria allow the passive transport of small polar molecules across the bacterial outer membrane. In vitro, they exhibit voltage gating depending on the experimental conditions. We review current hypotheses on the underlying molecular mechanism of voltage gating of OmpF porin and show how computer simulations can be used to examine each of the proposed mechanisms.

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Year:  2002        PMID: 12440693     DOI: 10.1139/o02-145

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  15 in total

1.  Residue ionization and ion transport through OmpF channels.

Authors:  Ekaterina M Nestorovich; Tatiana K Rostovtseva; Sergey M Bezrukov
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Channel activity of OmpF monitored in nano-BLMs.

Authors:  Eva K Schmitt; Maarten Vrouenraets; Claudia Steinem
Journal:  Biophys J       Date:  2006-06-16       Impact factor: 4.033

3.  Conductance and selectivity fluctuations in D127 mutants of the bacterial porin OmpF.

Authors:  Henk Miedema; Maarten Vrouenraets; Jenny Wierenga; Bob Eisenberg; Tilman Schirmer; Arnaud Baslé; Wim Meijberg
Journal:  Eur Biophys J       Date:  2006-07-21       Impact factor: 1.733

4.  Interaction of zwitterionic penicillins with the OmpF channel facilitates their translocation.

Authors:  Christophe Danelon; Ekaterina M Nestorovich; Mathias Winterhalter; Matteo Ceccarelli; Sergey M Bezrukov
Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

5.  An outer membrane protein undergoes enthalpy- and entropy-driven transitions.

Authors:  Belete R Cheneke; Mridhu Indic; Bert van den Berg; Liviu Movileanu
Journal:  Biochemistry       Date:  2012-06-20       Impact factor: 3.162

6.  Conductance hysteresis in the voltage-dependent anion channel.

Authors:  Shay M Rappaport; Oscar Teijido; David P Hoogerheide; Tatiana K Rostovtseva; Alexander M Berezhkovskii; Sergey M Bezrukov
Journal:  Eur Biophys J       Date:  2015-06-21       Impact factor: 1.733

7.  Analysis of gating transitions among the three major open states of the OpdK channel.

Authors:  Belete R Cheneke; Bert van den Berg; Liviu Movileanu
Journal:  Biochemistry       Date:  2011-05-12       Impact factor: 3.162

8.  Functions of the periplasmic loop of the porin MspA from Mycobacterium smegmatis.

Authors:  Jason Huff; Mikhail Pavlenok; Suja Sukumaran; Michael Niederweis
Journal:  J Biol Chem       Date:  2009-02-10       Impact factor: 5.157

9.  Elucidating in vivo structural dynamics in integral membrane protein by hydroxyl radical footprinting.

Authors:  Yi Zhu; Tiannan Guo; Jung Eun Park; Xin Li; Wei Meng; Arnab Datta; Marshall Bern; Sai Kiang Lim; Siu Kwan Sze
Journal:  Mol Cell Proteomics       Date:  2009-05-26       Impact factor: 5.911

Review 10.  Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory.

Authors:  Zoe Cournia; Toby W Allen; Ioan Andricioaei; Bruno Antonny; Daniel Baum; Grace Brannigan; Nicolae-Viorel Buchete; Jason T Deckman; Lucie Delemotte; Coral Del Val; Ran Friedman; Paraskevi Gkeka; Hans-Christian Hege; Jérôme Hénin; Marina A Kasimova; Antonios Kolocouris; Michael L Klein; Syma Khalid; M Joanne Lemieux; Norbert Lindow; Mahua Roy; Jana Selent; Mounir Tarek; Florentina Tofoleanu; Stefano Vanni; Sinisa Urban; David J Wales; Jeremy C Smith; Ana-Nicoleta Bondar
Journal:  J Membr Biol       Date:  2015-06-11       Impact factor: 1.843

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