Literature DB >> 11943761

Chromatin remodeling enzymes: taming the machines. Third in review series on chromatin dynamics.

Craig L Peterson1.   

Abstract

Members of the ATP-dependent family of chromatin remodeling enzymes play key roles in the regulation of transcription, development, DNA repair and cell cycle. Each of these enzymes are multi-subunit assemblies that hydrolyze thousands of molecules of ATP in order to change nucleosome positions, disrupt DNA-histone interactions and perhaps destabilize chromatin folding. Here I review recent studies that suggest these potent machines can be 'tamed' by one of several mechanisms: targeting their activity to localized regions, blocking their chromatin binding activity or inhibiting their remodeling activity.

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Year:  2002        PMID: 11943761      PMCID: PMC1084063          DOI: 10.1093/embo-reports/kvf075

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  30 in total

1.  Roles of the histone H2A-H2B dimers and the (H3-H4)(2) tetramer in nucleosome remodeling by the SWI-SNF complex.

Authors:  L A Boyer; X Shao; R H Ebright; C L Peterson
Journal:  J Biol Chem       Date:  2000-04-21       Impact factor: 5.157

2.  Functional delineation of three groups of the ATP-dependent family of chromatin remodeling enzymes.

Authors:  L A Boyer; C Logie; E Bonte; P B Becker; P A Wade; A P Wolffe; C Wu; A N Imbalzano; C L Peterson
Journal:  J Biol Chem       Date:  2000-06-23       Impact factor: 5.157

3.  SWI/SNF chromatin remodeling requires changes in DNA topology.

Authors:  I Gavin; P J Horn; C L Peterson
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

4.  Sir3-dependent assembly of supramolecular chromatin structures in vitro.

Authors:  P T Georgel; M A Palacios DeBeer; G Pietz; C A Fox; J C Hansen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-10       Impact factor: 11.205

5.  The core histone N termini function independently of linker histones during chromatin condensation.

Authors:  L M Carruthers; J C Hansen
Journal:  J Biol Chem       Date:  2000-11-24       Impact factor: 5.157

6.  Human SWI/SNF nucleosome remodeling activity is partially inhibited by linker histone H1.

Authors:  D A Hill; A N Imbalzano
Journal:  Biochemistry       Date:  2000-09-26       Impact factor: 3.162

7.  The ISWI chromatin-remodeling protein is required for gene expression and the maintenance of higher order chromatin structure in vivo.

Authors:  R Deuring; L Fanti; J A Armstrong; M Sarte; O Papoulas; M Prestel; G Daubresse; M Verardo; S L Moseley; M Berloco; T Tsukiyama; C Wu; S Pimpinelli; J W Tamkun
Journal:  Mol Cell       Date:  2000-02       Impact factor: 17.970

8.  Global role for chromatin remodeling enzymes in mitotic gene expression.

Authors:  J E Krebs; C J Fry; M L Samuels; C L Peterson
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

9.  dMi-2, a hunchback-interacting protein that functions in polycomb repression.

Authors:  J Kehle; D Beuchle; S Treuheit; B Christen; J A Kennison; M Bienz; J Müller
Journal:  Science       Date:  1998-12-04       Impact factor: 47.728

10.  Generation of superhelical torsion by ATP-dependent chromatin remodeling activities.

Authors:  K Havas; A Flaus; M Phelan; R Kingston; P A Wade; D M Lilley; T Owen-Hughes
Journal:  Cell       Date:  2000-12-22       Impact factor: 41.582

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  27 in total

1.  A methylation-mediator complex in hormone signaling.

Authors:  Wei Xu; Helen Cho; Shilpa Kadam; Ester M Banayo; Scott Anderson; John R Yates; Beverly M Emerson; Ronald M Evans
Journal:  Genes Dev       Date:  2004-01-16       Impact factor: 11.361

Review 2.  Regulation of human fetal hemoglobin: new players, new complexities.

Authors:  Arthur Bank
Journal:  Blood       Date:  2005-08-18       Impact factor: 22.113

3.  Chromatin structure exhibits spatio-temporal heterogeneity within the cell nucleus.

Authors:  Bidisha Banerjee; Dipanjan Bhattacharya; G V Shivashankar
Journal:  Biophys J       Date:  2006-06-30       Impact factor: 4.033

Review 4.  Role of protein tyrosine phosphatases in cancer.

Authors:  Tasneem Motiwala; Samson T Jacob
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2006

5.  The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding.

Authors:  Tiziana Bonaldi; Gernot Längst; Ralf Strohner; Peter B Becker; Marco E Bianchi
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

6.  A systems view of the protein expression process.

Authors:  Sucheta Gokhale; Dimpal Nyayanit; Chetan Gadgil
Journal:  Syst Synth Biol       Date:  2011-10-19

Review 7.  Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes.

Authors:  Cedric R Clapier; Janet Iwasa; Bradley R Cairns; Craig L Peterson
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

8.  Lsh, a modulator of CpG methylation, is crucial for normal histone methylation.

Authors:  Qingsheng Yan; Jiaqiang Huang; Tao Fan; Heming Zhu; Kathrin Muegge
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

9.  Formation of higher-order secondary and tertiary chromatin structures by genomic mouse mammary tumor virus promoters.

Authors:  Philippe T Georgel; Terace M Fletcher; Gordon L Hager; Jeffrey C Hansen
Journal:  Genes Dev       Date:  2003-07-01       Impact factor: 11.361

10.  Lsh, an epigenetic guardian of repetitive elements.

Authors:  Jiaqiang Huang; Tao Fan; Qingsheng Yan; Heming Zhu; Stephen Fox; Haleem J Issaq; Lionel Best; Lisa Gangi; David Munroe; Kathrin Muegge
Journal:  Nucleic Acids Res       Date:  2004-09-24       Impact factor: 16.971

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