Literature DB >> 11172715

SWI/SNF chromatin remodeling requires changes in DNA topology.

I Gavin1, P J Horn, C L Peterson.   

Abstract

ySWI/SNF complex belongs to a family of enzymes that use the energy of ATP hydrolysis to remodel chromatin structure. Here we examine the role of DNA topology in the mechanism of ySWI/SNF remodeling. We find that the ability of ySWI/SNF to enhance accessibility of nucleosomal DNA is nearly eliminated when DNA topology is constrained in small circular nucleosomal arrays and that this inhibition can be alleviated by topoisomerases. Furthermore, we demonstrate that remodeling of these substrates does not require dramatic histone octamer movements or displacement. Our results suggest a model in which ySWI/SNF remodels nucleosomes by using the energy of ATP hydrolysis to drive local changes in DNA twist.

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Year:  2001        PMID: 11172715     DOI: 10.1016/s1097-2765(01)00158-7

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  42 in total

1.  RapA, a bacterial homolog of SWI2/SNF2, stimulates RNA polymerase recycling in transcription.

Authors:  M V Sukhodolets; J E Cabrera; H Zhi; D J Jin
Journal:  Genes Dev       Date:  2001-12-15       Impact factor: 11.361

2.  Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA.

Authors:  Brent D Brower-Toland; Corey L Smith; Richard C Yeh; John T Lis; Craig L Peterson; Michelle D Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

3.  Nucleosome remodeling by the human SWI/SNF complex requires transient global disruption of histone-DNA interactions.

Authors:  Sayura Aoyagi; Geeta Narlikar; Chunyang Zheng; Saïd Sif; Robert E Kingston; Jeffrey J Hayes
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

Review 4.  Chromatin remodeling enzymes: taming the machines. Third in review series on chromatin dynamics.

Authors:  Craig L Peterson
Journal:  EMBO Rep       Date:  2002-04       Impact factor: 8.807

5.  Evidence for DNA translocation by the ISWI chromatin-remodeling enzyme.

Authors:  Iestyn Whitehouse; Chris Stockdale; Andrew Flaus; Mark D Szczelkun; Tom Owen-Hughes
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

6.  hSWI/SNF-catalyzed nucleosome sliding does not occur solely via a twist-diffusion mechanism.

Authors:  Sayura Aoyagi; Jeffrey J Hayes
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

7.  Z-DNA-binding proteins can act as potent effectors of gene expression in vivo.

Authors:  Doo-Byoung Oh; Yang-Gyun Kim; Alexander Rich
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

8.  SWI/SNF-dependent long-range remodeling of yeast HIS3 chromatin.

Authors:  Yeonjung Kim; David J Clark
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-13       Impact factor: 11.205

9.  Chromatin remodeling by RSC involves ATP-dependent DNA translocation.

Authors:  Anjanabha Saha; Jacqueline Wittmeyer; Bradley R Cairns
Journal:  Genes Dev       Date:  2002-08-15       Impact factor: 11.361

Review 10.  Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes.

Authors:  Cedric R Clapier; Janet Iwasa; Bradley R Cairns; Craig L Peterson
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

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