Literature DB >> 11902887

Formation and stability of enolates of acetamide and acetate anion: an Eigen plot for proton transfer at alpha-carbonyl carbon.

John P Richard1, Glenn Williams, AnnMarie C O'Donoghue, Tina L Amyes.   

Abstract

Second-order rate constants were determined in D(2)O for deprotonation of acetamide, N,N-dimethylacetamide, and acetate anion by deuterioxide ion and for deprotonation of acetamide by quinuclidine. The values of k(B) = 4.8 x 10(-8) M(-1) s(-1) for deprotonation of acetamide by quinuclidine (pK(BH) = 11.5) and k(BH) = 2-5 x 10(9) M(-1) s(-1) for the encounter-limited reverse protonation of the enolate by protonated quinuclidine give pK(a)(C) = 28.4 for ionization of acetamide as a carbon acid. The limiting value of k(HOH) = 1 x 10(11) s(-1) for protonation of the enolate of acetate anion by solvent water and k(HO) = 3.5 x 10(-9) M(-1) s(-1) for deprotonation of acetate anion by HO(-) give pK(a)(C) approximately 33.5 for acetate anion. The change in the rate-limiting step from chemical proton transfer to solvent reorganization results in a downward break in the slope of the plot of log k(HO) against carbon acid pK(a) for deprotonation of a wide range of neutral alpha-carbonyl carbon acids by hydroxide ion, from -0.40 to -1.0. Good estimates are reported for the stabilization of the carbonyl group relative to the enol tautomer by electron donation from alpha-SEt, alpha-OMe, alpha-NH(2), and alpha-O(-) substituents. The alpha-NH(2) and alpha-OMe groups show similar stabilizing interactions with the carbonyl group, while the interaction of alpha-O(-) is only 3.4 kcal/mol more stabilizing than for alpha-OH. We propose that destabilization of the enolate intermediates of enzymatic reactions results in an increasing recruitment of metal ions by the enzyme to provide electrophilic catalysis of enolate formation.

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Year:  2002        PMID: 11902887     DOI: 10.1021/ja0125321

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  22 in total

1.  A paradigm for enzyme-catalyzed proton transfer at carbon: triosephosphate isomerase.

Authors:  John P Richard
Journal:  Biochemistry       Date:  2012-03-20       Impact factor: 3.162

Review 2.  The PLP cofactor: lessons from studies on model reactions.

Authors:  John P Richard; Tina L Amyes; Juan Crugeiras; Ana Rios
Journal:  Biochim Biophys Acta       Date:  2010-12-20

3.  A simple method to determine kinetic deuterium isotope effects provides evidence that proton transfer to carbon proceeds over and not through the reaction barrier.

Authors:  Wing-Yin Tsang; John P Richard
Journal:  J Am Chem Soc       Date:  2007-08-04       Impact factor: 15.419

4.  Basis for the equilibrium constant in the interconversion of l-lysine and l-beta-lysine by lysine 2,3-aminomutase.

Authors:  Dawei Chen; Justinn Tanem; Perry A Frey
Journal:  Biochim Biophys Acta       Date:  2006-12-20

5.  Hydron transfer catalyzed by triosephosphate isomerase. Products of the direct and phosphite-activated isomerization of [1-(13)C]-glycolaldehyde in D(2)O.

Authors:  Maybelle K Go; Tina L Amyes; John P Richard
Journal:  Biochemistry       Date:  2009-06-23       Impact factor: 3.162

6.  Proton transfer from C-6 of uridine 5'-monophosphate catalyzed by orotidine 5'-monophosphate decarboxylase: formation and stability of a vinyl carbanion intermediate and the effect of a 5-fluoro substituent.

Authors:  Wing-Yin Tsang; B McKay Wood; Freeman M Wong; Weiming Wu; John A Gerlt; Tina L Amyes; John P Richard
Journal:  J Am Chem Soc       Date:  2012-08-21       Impact factor: 15.419

7.  Bovine serum albumin-catalyzed deprotonation of [1-(13)C]glycolaldehyde: protein reactivity toward deprotonation of the alpha-hydroxy alpha-carbonyl carbon.

Authors:  Maybelle K Go; M Merced Malabanan; Tina L Amyes; John P Richard
Journal:  Biochemistry       Date:  2010-09-07       Impact factor: 3.162

8.  Structure-reactivity effects on primary deuterium isotope effects on protonation of ring-substituted alpha-methoxystyrenes.

Authors:  Wing-Yin Tsang; John P Richard
Journal:  J Am Chem Soc       Date:  2009-10-07       Impact factor: 15.419

9.  The three-dimensional crystal structure of the PrpF protein of Shewanella oneidensis complexed with trans-aconitate: insights into its biological function.

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Journal:  Protein Sci       Date:  2007-06-13       Impact factor: 6.725

Review 10.  Pyridoxal 5'-phosphate: electrophilic catalyst extraordinaire.

Authors:  John P Richard; Tina L Amyes; Juan Crugeiras; Ana Rios
Journal:  Curr Opin Chem Biol       Date:  2009-07-27       Impact factor: 8.822

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