Literature DB >> 11889046

GAL4 directs nucleosome sliding induced by NURF.

Ju-Gyeong Kang1, Ali Hamiche, Carl Wu.   

Abstract

The Drosophila nucleosome remodeling factor (NURF) is an imitation switch (ISWI)-containing chromatin remodeling complex that can catalyze nucleosome repositioning at promoter regions to regulate access by the transcription machinery. Mononucleosomes reconstituted in vitro by salt dialysis adopt an ensemble of translational positions on DNA templates. NURF induces bi-directional 'sliding' of these nucleosomes to a subset of preferred positions. Here we show that mononucleosome sliding catalyzed by NURF bears similarity to nucleosome movement induced by elevated temperature. Moreover, we demonstrate that the GAL4 DNA-binding domain can extend NURF-induced nucleosome movement on a GAL4-E4 promoter, expanding the stretch of histone-free DNA at GAL4 recognition sites. The direction of NURF-induced nucleosome movement can be significantly modulated by asymmetric placement of tandem GAL4 sites relative to the nucleosome core particle. As such, sequence-specific, transcription factor-directed nucleosome sliding is likely to have substantial influence on promoter activation.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 11889046      PMCID: PMC125925          DOI: 10.1093/emboj/21.6.1406

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  62 in total

1.  DNA and protein determinants of nucleosome positioning on sea urchin 5S rRNA gene sequences in vitro.

Authors:  F Dong; J C Hansen; K E van Holde
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

2.  ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor.

Authors:  T Ito; M Bulger; M J Pazin; R Kobayashi; J T Kadonaga
Journal:  Cell       Date:  1997-07-11       Impact factor: 41.582

3.  Purification and biochemical heterogeneity of the mammalian SWI-SNF complex.

Authors:  W Wang; J Côté; Y Xue; S Zhou; P A Khavari; S R Biggar; C Muchardt; G V Kalpana; S P Goff; M Yaniv; J L Workman; G R Crabtree
Journal:  EMBO J       Date:  1996-10-01       Impact factor: 11.598

4.  Remodeling the chromatin structure of a nucleosome array by transcription factor-targeted trans-displacement of histones.

Authors:  T Owen-Hughes; J L Workman
Journal:  EMBO J       Date:  1996-09-02       Impact factor: 11.598

5.  The yeast SWI-SNF complex facilitates binding of a transcriptional activator to nucleosomal sites in vivo.

Authors:  L G Burns; C L Peterson
Journal:  Mol Cell Biol       Date:  1997-08       Impact factor: 4.272

6.  The binding of a Fos/Jun heterodimer can completely disrupt the structure of a nucleosome.

Authors:  K W Ng; P Ridgway; D R Cohen; D J Tremethick
Journal:  EMBO J       Date:  1997-04-15       Impact factor: 11.598

7.  RSC, an essential, abundant chromatin-remodeling complex.

Authors:  B R Cairns; Y Lorch; Y Li; M Zhang; L Lacomis; H Erdjument-Bromage; P Tempst; J Du; B Laurent; R D Kornberg
Journal:  Cell       Date:  1996-12-27       Impact factor: 41.582

8.  Glucocorticoid receptor-glucocorticoid response element binding stimulates nucleosome disruption by the SWI/SNF complex.

Authors:  A K Ostlund Farrants; P Blomquist; H Kwon; O Wrange
Journal:  Mol Cell Biol       Date:  1997-02       Impact factor: 4.272

9.  Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex.

Authors:  T Owen-Hughes; R T Utley; J Côté; C L Peterson; J L Workman
Journal:  Science       Date:  1996-07-26       Impact factor: 47.728

10.  Nucleosome mobility and the maintenance of nucleosome positioning.

Authors:  M J Pazin; P Bhargava; E P Geiduschek; J T Kadonaga
Journal:  Science       Date:  1997-05-02       Impact factor: 47.728

View more
  26 in total

1.  Dynamic properties of nucleosomes during thermal and ATP-driven mobilization.

Authors:  Andrew Flaus; Tom Owen-Hughes
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

Review 2.  Nucleosome sliding: facts and fiction.

Authors:  Peter B Becker
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

3.  Topography of the ISW2-nucleosome complex: insights into nucleosome spacing and chromatin remodeling.

Authors:  Mohamedi N Kagalwala; Benjamin J Glaus; Weiwei Dang; Martin Zofall; Blaine Bartholomew
Journal:  EMBO J       Date:  2004-05-06       Impact factor: 11.598

Review 4.  Mechanisms of ATP dependent chromatin remodeling.

Authors:  Vamsi K Gangaraju; Blaine Bartholomew
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

5.  Chromatin remodeling complex NURF regulates thymocyte maturation.

Authors:  Joseph W Landry; Subhadra Banerjee; Barbara Taylor; Peter D Aplan; Alfred Singer; Carl Wu
Journal:  Genes Dev       Date:  2011-02-01       Impact factor: 11.361

Review 6.  Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes.

Authors:  Cedric R Clapier; Janet Iwasa; Bradley R Cairns; Craig L Peterson
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

7.  Regulation of V(D)J recombination by nucleosome positioning at recombination signal sequences.

Authors:  Matthias Baumann; Adamantios Mamais; Fraser McBlane; Hua Xiao; Joan Boyes
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

8.  Human SWI/SNF drives sequence-directed repositioning of nucleosomes on C-myc promoter DNA minicircles.

Authors:  Hillel I Sims; Jacqueline M Lane; Natalia P Ulyanova; Gavin R Schnitzler
Journal:  Biochemistry       Date:  2007-09-18       Impact factor: 3.162

9.  Three-dimensional structure of human chromatin accessibility complex hCHRAC by electron microscopy.

Authors:  Minghui Hu; Yian-Biao Zhang; Luping Qian; Raymond P Briñas; Larisa Kuznetsova; James F Hainfeld
Journal:  J Struct Biol       Date:  2008-09-10       Impact factor: 2.867

10.  A novel Pzg-NURF complex regulates Notch target gene activity.

Authors:  Sabrina J Kugler; Anja C Nagel
Journal:  Mol Biol Cell       Date:  2010-08-04       Impact factor: 4.138

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.