Literature DB >> 11818529

The mechanism of catalysis of the chorismate to prephenate reaction by the Escherichia coli mutase enzyme.

Sun Hur1, Thomas C Bruice.   

Abstract

Molecular dynamics studies of the Escherichia coli chorismate mutase (EcCM), containing at the active site chorismate and in turn the transition state (TS), have been performed. The simulations show that TS is not bound any tighter than chorismate. Comparison of average polar interactions show they are virtually identical for interactions of EcCM with chorismate and the TS, whereas hydrophobic interactions with TS are much weaker than with chorismate. Interactions and the mechanism of catalysis of chorismate --> prephenate by the EcCM enzyme are discussed.

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Year:  2002        PMID: 11818529      PMCID: PMC122163          DOI: 10.1073/pnas.022628599

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  10 in total

1.  Substrate conformational transitions in the active site of chorismate mutase: their role in the catalytic mechanism.

Authors:  H Guo; Q Cui; W N Lipscomb; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

2.  Bacillus subtilis chorismate mutase is partially diffusion-controlled.

Authors:  P Mattei; P Kast; D Hilvert
Journal:  Eur J Biochem       Date:  1999-04

Review 3.  New insight into the catalytic mechanism of chorismate mutases from structural studies.

Authors:  A Y Lee; J D Stewart; J Clardy; B Ganem
Journal:  Chem Biol       Date:  1995-04

4.  Transition-state stabilization and enzymic catalysis. Kinetic and molecular orbital studies of the rearrangement of chorismate to prephenate.

Authors:  P R Andrews; G D Smith; I G Young
Journal:  Biochemistry       Date:  1973-08-28       Impact factor: 3.162

5.  Binding of a high-energy substrate conformer in antibody catalysis.

Authors:  A P Campbell; T M Tarasow; W Massefski; P E Wright; D Hilvert
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

6.  Monofunctional chorismate mutase from Bacillus subtilis: FTIR studies and the mechanism of action of the enzyme.

Authors:  J V Gray; J R Knowles
Journal:  Biochemistry       Date:  1994-08-23       Impact factor: 3.162

7.  The monofunctional chorismate mutase from Bacillus subtilis. Structure determination of chorismate mutase and its complexes with a transition state analog and prephenate, and implications for the mechanism of the enzymatic reaction.

Authors:  Y M Chook; J V Gray; H Ke; W N Lipscomb
Journal:  J Mol Biol       Date:  1994-07-29       Impact factor: 5.469

8.  The crystal structure of allosteric chorismate mutase at 2.2-A resolution.

Authors:  Y Xue; W N Lipscomb; R Graf; G Schnappauf; G Braus
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-08       Impact factor: 11.205

9.  The crystallization and preliminary X-ray analysis of allosteric chorismate mutase.

Authors:  Y Xue; W N Lipscomb
Journal:  J Mol Biol       Date:  1994-08-12       Impact factor: 5.469

10.  Secondary tritium isotope effects as probes of the enzymic and nonenzymic conversion of chorismate to prephenate.

Authors:  L Addadi; E K Jaffe; J R Knowles
Journal:  Biochemistry       Date:  1983-09-13       Impact factor: 3.162

  10 in total
  12 in total

1.  The near attack conformation approach to the study of the chorismate to prephenate reaction.

Authors:  Sun Hur; Thomas C Bruice
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-01       Impact factor: 11.205

2.  pH Dependence of catalysis by Pseudomonas aeruginosa isochorismate-pyruvate lyase: implications for transition state stabilization and the role of lysine 42.

Authors:  Jose Olucha; Andrew N Ouellette; Qianyi Luo; Audrey L Lamb
Journal:  Biochemistry       Date:  2011-07-22       Impact factor: 3.162

3.  A dynamic view of enzyme catalysis.

Authors:  Aurora Jiménez; Pere Clapés; Ramon Crehuet
Journal:  J Mol Model       Date:  2008-03-06       Impact factor: 1.810

4.  Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis.

Authors:  Daniel Burschowsky; André van Eerde; Mats Ökvist; Alexander Kienhöfer; Peter Kast; Donald Hilvert; Ute Krengel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-24       Impact factor: 11.205

5.  Modification of residue 42 of the active site loop with a lysine-mimetic side chain rescues isochorismate-pyruvate lyase activity in Pseudomonas aeruginosa PchB.

Authors:  José Olucha; Kathleen M Meneely; Audrey L Lamb
Journal:  Biochemistry       Date:  2012-09-12       Impact factor: 3.162

Review 6.  Examining the case for the effect of barrier compression on tunneling, vibrationally enhanced catalysis, catalytic entropy and related issues.

Authors:  Shina Caroline Lynn Kamerlin; Janez Mavri; A Warshel
Journal:  FEBS Lett       Date:  2010-04-29       Impact factor: 4.124

7.  Interdomain Conformational Changes Provide Allosteric Regulation en Route to Chorismate.

Authors:  Ali Reza Nazmi; Eric J M Lang; Yu Bai; Timothy M Allison; Mohamad H Othman; Santosh Panjikar; Vickery L Arcus; Emily J Parker
Journal:  J Biol Chem       Date:  2016-08-08       Impact factor: 5.157

Review 8.  Pericyclic reactions catalyzed by chorismate-utilizing enzymes.

Authors:  Audrey L Lamb
Journal:  Biochemistry       Date:  2011-08-12       Impact factor: 3.162

9.  Methyltransferases do not work by compression, cratic, or desolvation effects, but by electrostatic preorganization.

Authors:  Jeronimo Lameira; Ram Prasad Bora; Zhen T Chu; Arieh Warshel
Journal:  Proteins       Date:  2015-01-07

10.  Entropic and enthalpic components of catalysis in the mutase and lyase activities of Pseudomonas aeruginosa PchB.

Authors:  Qianyi Luo; Kathleen M Meneely; Audrey L Lamb
Journal:  J Am Chem Soc       Date:  2011-04-19       Impact factor: 15.419

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