Literature DB >> 14523243

The near attack conformation approach to the study of the chorismate to prephenate reaction.

Sun Hur1, Thomas C Bruice.   

Abstract

Standard free energies (DeltaGN degree) for formation of near attack conformers, those ground state conformers that can convert directly to the transition state, were calculated for the Claisen rearrangement of chorismate to prephenate in six different environments: water, wild-type enzymes from Bacillus subtilis and Escherichia coli, their Arg90Cit and Glu52Ala mutants, and the 1F7 catalytic antibody. Values of the calculated DeltaGN degrees and the experimentally determined activation energies (DeltaG++) are linearly related with the slope of approximately equal to 1. This demonstrates that the relative rate of the chorismate --> prephenate reaction is overwhelmingly dependent on the efficiency of formation of near attack conformers in the ground state.

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Year:  2003        PMID: 14523243      PMCID: PMC218705          DOI: 10.1073/pnas.1534873100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  The mechanism of catalysis of the chorismate to prephenate reaction by the Escherichia coli mutase enzyme.

Authors:  Sun Hur; Thomas C Bruice
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

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3.  Apparent NAC effect in chorismate mutase reflects electrostatic transition state stabilization.

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6.  Comparison of formation of reactive conformers (NACs) for the Claisen rearrangement of chorismate to prephenate in water and in the E. coli mutase: the efficiency of the enzyme catalysis.

Authors:  Sun Hur; Thomas C Bruice
Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

7.  Contributions of conformational compression and preferential transition state stabilization to the rate enhancement by chorismate mutase.

Authors:  Cristiano Ruch Werneck Guimarães; Matthew P Repasky; Jayaraman Chandrasekhar; Julian Tirado-Rives; William L Jorgensen
Journal:  J Am Chem Soc       Date:  2003-06-11       Impact factor: 15.419

8.  Investigation of solvent effects for the Claisen rearrangement of chorismate to prephenate: mechanistic interpretation via near attack conformations.

Authors:  Matthew P Repasky; Cristiano Ruch Werneck Guimarães; Jayaraman Chandrasekhar; Julian Tirado-Rives; William L Jorgensen
Journal:  J Am Chem Soc       Date:  2003-06-04       Impact factor: 15.419

9.  Enzymes do what is expected (chalcone isomerase versus chorismate mutase).

Authors:  Sun Hur; Thomas C Bruice
Journal:  J Am Chem Soc       Date:  2003-02-12       Impact factor: 15.419

10.  Selective stabilization of the chorismate mutase transition state by a positively charged hydrogen bond donor.

Authors:  Alexander Kienhöfer; Peter Kast; Donald Hilvert
Journal:  J Am Chem Soc       Date:  2003-03-19       Impact factor: 15.419

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  37 in total

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4.  The proficiency of a thermophilic chorismate mutase enzyme is solely through an entropic advantage in the enzyme reaction.

Authors:  Xiaohua Zhang; Thomas C Bruice
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-12       Impact factor: 11.205

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8.  How similar are enzyme active site geometries derived from quantum mechanical theozymes to crystal structures of enzyme-inhibitor complexes? Implications for enzyme design.

Authors:  Jason Dechancie; Fernando R Clemente; Adam J T Smith; Hakan Gunaydin; Yi-Lei Zhao; Xiyun Zhang; K N Houk
Journal:  Protein Sci       Date:  2007-09       Impact factor: 6.725

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10.  Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis.

Authors:  Daniel Burschowsky; André van Eerde; Mats Ökvist; Alexander Kienhöfer; Peter Kast; Donald Hilvert; Ute Krengel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-24       Impact factor: 11.205

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