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Literature DB >> 11752343

InBase: the Intein Database.

Abstract

Inteins are self-catalytic protein splicing elements. InBase (http://www.neb.com/neb/inteins.html), the Intein Database and Registry, is a curated compilation of published and unpublished information about protein splicing. It presents general information as well as detailed data for each intein, including tabulated comparisons and a comprehensive bibliography. An intein-specific BLAST server is now available to assist in identifying new inteins.

Mesh：

Year: 2002 PMID： 11752343 PMCID： PMC99080 DOI： 10.1093/nar/30.1.383

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

11 in total

1. Structural insights into the protein splicing mechanism of PI-SceI.

Authors: B W Poland; M Q Xu; F A Quiocho
Journal: J Biol Chem Date: 2000-06-02 Impact factor: 5.157

2. Dissecting the Chemistry of Protein Splicing and Its Applications.

Authors:
Journal: Angew Chem Int Ed Engl Date: 2000-02 Impact factor: 15.336

3. Protein engineering by expressed protein ligation.

Authors: U K Blaschke; J Silberstein; T W Muir
Journal: Methods Enzymol Date: 2000 Impact factor: 1.600

Review 4. Mitochondrial gene therapy: an arena for the biomedical use of inteins.

Authors: A D de Grey
Journal: Trends Biotechnol Date: 2000-09 Impact factor: 19.536

5. Inteins as enzymes.

Authors: H Paulus
Journal: Bioorg Chem Date: 2001-06 Impact factor: 5.275

Review 6. Protein splicing and its applications.

Authors: F B Perler; E Adam
Journal: Curr Opin Biotechnol Date: 2000-08 Impact factor: 9.740

7. An alternative protein splicing mechanism for inteins lacking an N-terminal nucleophile.

Authors: M W Southworth; J Benner; F B Perler
Journal: EMBO J Date: 2000-09-15 Impact factor: 11.598

Review 8. Homing endonucleases: keeping the house in order.

Authors: M Belfort; R J Roberts
Journal: Nucleic Acids Res Date: 1997-09-01 Impact factor: 16.971

9. Protein splicing elements: inteins and exteins--a definition of terms and recommended nomenclature.

Authors: F B Perler; E O Davis; G E Dean; F S Gimble; W E Jack; N Neff; C J Noren; J Thorner; M Belfort
Journal: Nucleic Acids Res Date: 1994-04-11 Impact factor: 16.971

10. Homing of a DNA endonuclease gene by meiotic gene conversion in Saccharomyces cerevisiae.

Authors: F S Gimble; J Thorner
Journal: Nature Date: 1992-05-28 Impact factor: 49.962

156 in total

1. Intein-mediated assembly of a functional beta-glucuronidase in transgenic plants.

Authors: Jianjun Yang; George C Fox; Tina V Henry-Smith
Journal: Proc Natl Acad Sci U S A Date: 2003-03-10 Impact factor: 11.205

2. Bacterial thymidylate synthase with intein, group II Intron, and distinctive ThyX motifs.

Authors: Xiang-Qin Liu; Jing Yang
Journal: J Bacteriol Date: 2004-09 Impact factor: 3.490

3. Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae.

Authors: Defne Arslan; Matthieu Legendre; Virginie Seltzer; Chantal Abergel; Jean-Michel Claverie
Journal: Proc Natl Acad Sci U S A Date: 2011-10-10 Impact factor: 11.205

4. Unprecedented rates and efficiencies revealed for new natural split inteins from metagenomic sources.

Authors: Patricia Carvajal-Vallejos; Roser Pallissé; Henning D Mootz; Stefan R Schmidt
Journal: J Biol Chem Date: 2012-06-28 Impact factor: 5.157

5. The Deinococcus radiodurans Snf2 intein caught in the act: detection of the Class 3 intein signature Block F branched intermediate.

Authors: Lear E Brace; Maurice W Southworth; Kazuo Tori; Michelle L Cushing; Francine Perler
Journal: Protein Sci Date: 2010-08 Impact factor: 6.725

6. Giant virus with a remarkable complement of genes infects marine zooplankton.

Authors: Matthias G Fischer; Michael J Allen; William H Wilson; Curtis A Suttle
Journal: Proc Natl Acad Sci U S A Date: 2010-10-25 Impact factor: 11.205

7. Canonical protein splicing of a class 1 intein that has a class 3 noncanonical sequence motif.

Authors: Julie N Reitter; Kenneth V Mills
Journal: J Bacteriol Date: 2010-12-03 Impact factor: 3.490

8. Mutational analysis of splicing activities of ribonucleotide reductase α subunit protein from lytic bacteriophage P1201.

Authors: Shu-Chen Kan; Liang-Kun Yu; Jiau-Hua Chen; Hui-Yu Hu; Wen-Hwei Hsu
Journal: Curr Microbiol Date: 2011-01-06 Impact factor: 2.188

9. SufB intein of Mycobacterium tuberculosis as a sensor for oxidative and nitrosative stresses.

Authors: Natalya I Topilina; Cathleen M Green; Pradeepa Jayachandran; Danielle S Kelley; Matthew J Stanger; Carol Lyn Piazza; Sasmita Nayak; Marlene Belfort
Journal: Proc Natl Acad Sci U S A Date: 2015-08-03 Impact factor: 11.205

10. Proteomics in Vaccinology and Immunobiology: An Informatics Perspective of the Immunone.

Authors: Irini A. Doytchinova; Paul Taylor; Darren R. Flower
Journal: J Biomed Biotechnol Date: 2003