Literature DB >> 11742133

Removal of surface charge-charge interactions from ubiquitin leaves the protein folded and very stable.

Vakhtang V Loladze1, George I Makhatadze.   

Abstract

The contribution of solvent-exposed charged residues to protein stability was evaluated using ubiquitin as a model protein. We combined site-directed mutagenesis and specific chemical modifications to first replace all Arg residues with Lys, followed by carbomylation of Lys-amino groups. Under the conditions in which all carboxylic groups are protonated (at pH 2), the chemically modified protein is folded and very stable (DeltaG = 18 kJ/mol). These results indicate that surface charge-charge interactions are not an essential fundamental force for protein folding and stability.

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Year:  2002        PMID: 11742133      PMCID: PMC2368776          DOI: 10.1110/ps.29902

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  25 in total

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Authors:  J M Sanchez-Ruiz; G I Makhatadze
Journal:  Trends Biotechnol       Date:  2001-04       Impact factor: 19.536

2.  Engineering a thermostable protein via optimization of charge-charge interactions on the protein surface.

Authors:  V V Loladze; B Ibarra-Molero; J M Sanchez-Ruiz; G I Makhatadze
Journal:  Biochemistry       Date:  1999-12-14       Impact factor: 3.162

3.  Two exposed amino acid residues confer thermostability on a cold shock protein.

Authors:  D Perl; U Mueller; U Heinemann; F X Schmid
Journal:  Nat Struct Biol       Date:  2000-05

4.  Charge-charge interactions influence the denatured state ensemble and contribute to protein stability.

Authors:  C N Pace; R W Alston; K L Shaw
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

5.  Heat capacity changes upon burial of polar and nonpolar groups in proteins.

Authors:  V V Loladze; D N Ermolenko; G I Makhatadze
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

6.  Contribution of the 30/36 hydrophobic contact at the C-terminus of the alpha-helix to the stability of the ubiquitin molecule.

Authors:  S T Thomas; G I Makhatadze
Journal:  Biochemistry       Date:  2000-08-22       Impact factor: 3.162

7.  Anion binding to the ubiquitin molecule.

Authors:  G I Makhatadze; M M Lopez; J M Richardson; S T Thomas
Journal:  Protein Sci       Date:  1998-03       Impact factor: 6.725

8.  Carbamylation of pepsinogen and pepsin.

Authors:  S Rimon; G E Perlmann
Journal:  J Biol Chem       Date:  1968-07-10       Impact factor: 5.157

9.  Effect on protein stability of reversing the charge on amino groups.

Authors:  M Hollecker; T E Creighton
Journal:  Biochim Biophys Acta       Date:  1982-03-04

10.  pH-induced denaturation of proteins: a single salt bridge contributes 3-5 kcal/mol to the free energy of folding of T4 lysozyme.

Authors:  D E Anderson; W J Becktel; F W Dahlquist
Journal:  Biochemistry       Date:  1990-03-06       Impact factor: 3.162

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  16 in total

1.  Complexes of native ubiquitin and dodecyl sulfate illustrate the nature of hydrophobic and electrostatic interactions in the binding of proteins and surfactants.

Authors:  Bryan F Shaw; Grégory F Schneider; Haribabu Arthanari; Max Narovlyansky; Demetri Moustakas; Armando Durazo; Gerhard Wagner; George M Whitesides
Journal:  J Am Chem Soc       Date:  2011-10-13       Impact factor: 15.419

2.  Electrostatic contributions to T4 lysozyme stability: solvent-exposed charges versus semi-buried salt bridges.

Authors:  Feng Dong; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

3.  Conferring thermostability to mesophilic proteins through optimized electrostatic surfaces.

Authors:  Michael Torrez; Michael Schultehenrich; Dennis R Livesay
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

4.  Folding without charges.

Authors:  Martin Kurnik; Linda Hedberg; Jens Danielsson; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-27       Impact factor: 11.205

5.  Electrostatic contributions to the kinetics and thermodynamics of protein assembly.

Authors:  Daniele Dell'Orco; Wei-Feng Xue; Eva Thulin; Sara Linse
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

6.  Supercharging proteins can impart unusual resilience.

Authors:  Michael S Lawrence; Kevin J Phillips; David R Liu
Journal:  J Am Chem Soc       Date:  2007-08-01       Impact factor: 15.419

7.  Rational stabilization of enzymes by computational redesign of surface charge-charge interactions.

Authors:  Alexey V Gribenko; Mayank M Patel; Jiajing Liu; Scott A McCallum; Chunyu Wang; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-05       Impact factor: 11.205

8.  Modulation of folding energy landscape by charge-charge interactions: linking experiments with computational modeling.

Authors:  Franco O Tzul; Katrina L Schweiker; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-06       Impact factor: 11.205

Review 9.  Electrostatic Interactions in Protein Structure, Folding, Binding, and Condensation.

Authors:  Huan-Xiang Zhou; Xiaodong Pang
Journal:  Chem Rev       Date:  2018-01-10       Impact factor: 60.622

10.  Pathway for unfolding of ubiquitin in sodium dodecyl sulfate, studied by capillary electrophoresis.

Authors:  Grégory F Schneider; Bryan F Shaw; Andrew Lee; Emanuel Carillho; George M Whitesides
Journal:  J Am Chem Soc       Date:  2008-12-24       Impact factor: 15.419

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