Literature DB >> 11689454

Developmental regulation of DNA replication timing at the human beta globin locus.

I Simon1, T Tenzen, R Mostoslavsky, E Fibach, L Lande, E Milot, J Gribnau, F Grosveld, P Fraser, H Cedar.   

Abstract

The human beta globin locus replicates late in most cell types, but becomes early replicating in erythroid cells. Using FISH to map DNA replication timing around the endogenous beta globin locus and by applying a genetic approach in transgenic mice, we have demonstrated that both the late and early replication states are controlled by regulatory elements within the locus control region. These results also show that the pattern of replication timing is set up by mechanisms that work independently of gene transcription.

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Year:  2001        PMID: 11689454      PMCID: PMC125288          DOI: 10.1093/emboj/20.21.6150

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  36 in total

Review 1.  Demethylation and the establishment of kappa allelic exclusion.

Authors:  R Mostoslavsky; A Kirillov; Y H Ji; M Goldmit; M Holzmann; T Wirth; H Cedar; Y Bergman
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1999

2.  Conservation of sequence and structure flanking the mouse and human beta-globin loci: the beta-globin genes are embedded within an array of odorant receptor genes.

Authors:  M Bulger; J H van Doorninck; N Saitoh; A Telling; C Farrell; M A Bender; G Felsenfeld; R Axel; M Groudine; J H von Doorninck
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

Review 3.  Pausing for thought on the boundaries of imprinting.

Authors:  R Allshire; W Bickmore
Journal:  Cell       Date:  2000-09-15       Impact factor: 41.582

4.  Long-distance control of origin choice and replication timing in the human beta-globin locus are independent of the locus control region.

Authors:  D M Cimbora; D Schübeler; A Reik; J Hamilton; C Francastel; E M Epner; M Groudine
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

5.  Asynchronous replication of imprinted genes is established in the gametes and maintained during development.

Authors:  I Simon; T Tenzen; B E Reubinoff; D Hillman; J R McCarrey; H Cedar
Journal:  Nature       Date:  1999-10-28       Impact factor: 49.962

6.  Asynchronous DNA replication within the human beta-globin gene locus.

Authors:  E Epner; W C Forrester; M Groudine
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

Review 7.  Role of replication time in the control of tissue-specific gene expression.

Authors:  G P Holmquist
Journal:  Am J Hum Genet       Date:  1987-02       Impact factor: 11.025

8.  Delineation of individual human chromosomes in metaphase and interphase cells by in situ suppression hybridization using recombinant DNA libraries.

Authors:  P Lichter; T Cremer; J Borden; L Manuelidis; D C Ward
Journal:  Hum Genet       Date:  1988-11       Impact factor: 4.132

9.  Mapping of DNAase I sensitive regions on mitotic chromosomes.

Authors:  B S Kerem; R Goitein; G Diamond; H Cedar; M Marcus
Journal:  Cell       Date:  1984-09       Impact factor: 41.582

10.  DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci.

Authors:  M R Rountree; K E Bachman; S B Baylin
Journal:  Nat Genet       Date:  2000-07       Impact factor: 38.330

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  38 in total

Review 1.  Locus control regions.

Authors:  Qiliang Li; Kenneth R Peterson; Xiangdong Fang; George Stamatoyannopoulos
Journal:  Blood       Date:  2002-11-01       Impact factor: 22.113

2.  Asynchronous replication timing of imprinted loci is independent of DNA methylation, but consistent with differential subnuclear localization.

Authors:  Joost Gribnau; Konrad Hochedlinger; Ken Hata; En Li; Rudolf Jaenisch
Journal:  Genes Dev       Date:  2003-03-15       Impact factor: 11.361

3.  Replication of the chicken beta-globin locus: early-firing origins at the 5' HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications.

Authors:  Marie-Noëlle Prioleau; Marie-Claude Gendron; Olivier Hyrien
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

4.  Cytogenetic and immuno-FISH analysis of the 4q subtelomeric region, which is associated with facioscapulohumeral muscular dystrophy.

Authors:  Fan Yang; Chunbo Shao; Vettaikorumakankav Vedanarayanan; Melanie Ehrlich
Journal:  Chromosoma       Date:  2004-05-11       Impact factor: 4.316

5.  Heterochromatin on the inactive X chromosome delays replication timing without affecting origin usage.

Authors:  María Gómez; Neil Brockdorff
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-22       Impact factor: 11.205

Review 6.  Cdc6: a multi-functional molecular switch with critical role in carcinogenesis.

Authors:  Thodoris G Petrakis; Konstantinos Vougas; Vassilis G Gorgoulis
Journal:  Transcription       Date:  2012 May-Jun

7.  Temporal profile of replication of human chromosomes.

Authors:  Yesu Jeon; Stefan Bekiranov; Neerja Karnani; Philipp Kapranov; Srinka Ghosh; David MacAlpine; Charles Lee; Deog Su Hwang; Thomas R Gingeras; Anindya Dutta
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-21       Impact factor: 11.205

8.  Specific signals at the 3' end of the DHFR gene define one boundary of the downstream origin of replication.

Authors:  Larry D Mesner; Joyce L Hamlin
Journal:  Genes Dev       Date:  2005-05-01       Impact factor: 11.361

9.  The human beta-globin locus control region can silence as well as activate gene expression.

Authors:  Yong-Qing Feng; Renaud Warin; Taihao Li; Emmanuel Olivier; Arnaud Besse; Amanda Lobell; Haiqing Fu; Chii Mei Lin; Mirit I Aladjem; Eric E Bouhassira
Journal:  Mol Cell Biol       Date:  2005-05       Impact factor: 4.272

10.  Domain-wide regulation of DNA replication timing during mammalian development.

Authors:  Benjamin D Pope; Ichiro Hiratani; David M Gilbert
Journal:  Chromosome Res       Date:  2010-01       Impact factor: 5.239

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