Literature DB >> 3186709

Asynchronous DNA replication within the human beta-globin gene locus.

E Epner1, W C Forrester, M Groudine.   

Abstract

The timing of DNA replication of the human beta-globin gene locus has been studied by blot hybridization of newly synthesized BrdUrd-substituted DNA from cells in different stages of the S phase. Using probes that span greater than 120 kilobases across the human beta-globin gene locus, we show that the majority of this domain replicates in early S phase in the human erythroleukemia cell line K562 and in middle-to-late S phase in the lymphoid cell line Manca. However, in K562 cells three small regions display a strikingly different replication pattern than adjacent sequences. These islands, located in the inter-gamma-globin gene region and approximately 20 kilobases 5' to the epsilon-globin gene and 20 kilobases 3' to the beta-globin gene, replicate later and throughout S phase. A similar area is also present in the alpha-globin gene region in K562 cells. We suggest that these regions may represent sites of termination of replication forks.

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Year:  1988        PMID: 3186709      PMCID: PMC282358          DOI: 10.1073/pnas.85.21.8081

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Chromatin structure and developmental expression of the human alpha-globin cluster.

Authors:  M Yagi; R Gelinas; J T Elder; M Peretz; T Papayannopoulou; G Stamatoyannopoulos; M Groudine
Journal:  Mol Cell Biol       Date:  1986-04       Impact factor: 4.272

2.  Gamma delta beta-thalassaemias 1 and 2 are the result of a 100 kbp deletion in the human beta-globin cluster.

Authors:  R Taramelli; D Kioussis; E Vanin; K Bartram; J Groffen; J Hurst; F G Grosveld
Journal:  Nucleic Acids Res       Date:  1986-09-11       Impact factor: 16.971

3.  Different 3' end points of deletions causing delta beta-thalassemia and hereditary persistence of fetal hemoglobin: implications for the control of gamma-globin gene expression in man.

Authors:  D Tuan; E Feingold; M Newman; S M Weissman; B G Forget
Journal:  Proc Natl Acad Sci U S A       Date:  1983-11       Impact factor: 11.205

4.  The control of globin and other eukaryotic genes.

Authors:  O Smithies
Journal:  J Cell Physiol Suppl       Date:  1982

5.  Propagation of globin DNAase I-hypersensitive sites in absence of factors required for induction: a possible mechanism for determination.

Authors:  M Groudine; H Weintraub
Journal:  Cell       Date:  1982-08       Impact factor: 41.582

6.  Characterization of Giemsa dark- and light-band DNA.

Authors:  G Holmquist; M Gray; T Porter; J Jordan
Journal:  Cell       Date:  1982-11       Impact factor: 41.582

7.  Nucleotide sequence of the human parathyroid hormone gene.

Authors:  T J Vasicek; B E McDevitt; M W Freeman; B J Fennick; G N Hendy; J T Potts; A Rich; H M Kronenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

8.  Beta-globin gene inactivation by DNA translocation in gamma beta-thalassaemia.

Authors:  D Kioussis; E Vanin; T deLange; R A Flavell; F G Grosveld
Journal:  Nature       Date:  1983 Dec 15-21       Impact factor: 49.962

9.  Replication of alpha and beta globin DNA sequences occurs during early S phase in murine erythroleukemia cells.

Authors:  E Epner; R A Rifkind; P A Marks
Journal:  Proc Natl Acad Sci U S A       Date:  1981-05       Impact factor: 11.205

10.  Human fetal to adult hemoglobin switching: changes in chromatin structure of the beta-globin gene locus.

Authors:  M Groudine; T Kohwi-Shigematsu; R Gelinas; G Stamatoyannopoulos; T Papayannopoulou
Journal:  Proc Natl Acad Sci U S A       Date:  1983-12       Impact factor: 11.205

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  33 in total

1.  Long-distance control of origin choice and replication timing in the human beta-globin locus are independent of the locus control region.

Authors:  D M Cimbora; D Schübeler; A Reik; J Hamilton; C Francastel; E M Epner; M Groudine
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

2.  Developmental regulation of DNA replication timing at the human beta globin locus.

Authors:  I Simon; T Tenzen; R Mostoslavsky; E Fibach; L Lande; E Milot; J Gribnau; F Grosveld; P Fraser; H Cedar
Journal:  EMBO J       Date:  2001-11-01       Impact factor: 11.598

3.  Multiple sites of replication initiation in the human beta-globin gene locus.

Authors:  S Kamath; M Leffak
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

Review 4.  Locus control regions.

Authors:  Qiliang Li; Kenneth R Peterson; Xiangdong Fang; George Stamatoyannopoulos
Journal:  Blood       Date:  2002-11-01       Impact factor: 22.113

5.  Asynchronous replication timing of imprinted loci is independent of DNA methylation, but consistent with differential subnuclear localization.

Authors:  Joost Gribnau; Konrad Hochedlinger; Ken Hata; En Li; Rudolf Jaenisch
Journal:  Genes Dev       Date:  2003-03-15       Impact factor: 11.361

6.  The association of the human epsilon-globin gene with the nuclear matrix: a reconsideration.

Authors:  A J Bartjeliotou; G J Dimitriadis
Journal:  Mol Cell Biochem       Date:  1992-09-22       Impact factor: 3.396

7.  Replication asynchrony between homologs 15q11.2: cytogenetic evidence for genomic imprinting.

Authors:  Y Izumikawa; K Naritomi; K Hirayama
Journal:  Hum Genet       Date:  1991-05       Impact factor: 4.132

8.  High-resolution analysis of DNA replication domain organization across an R/G-band boundary.

Authors:  S Strehl; J M LaSalle; M Lalande
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

9.  Developmental regulation of DNA replication: replication fork barriers and programmed gene amplification in Tetrahymena thermophila.

Authors:  Z Zhang; D M Macalpine; G M Kapler
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

10.  Regulation of the replication of the murine immunoglobulin heavy chain gene locus: evaluation of the role of the 3' regulatory region.

Authors:  J S Michaelson; O Ermakova; B K Birshtein; N Ashouian; C Chevillard; R Riblet; C L Schildkraut
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

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