Literature DB >> 11588263

Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation.

F J LaRiviere1, A D Wolfson, O C Uhlenbeck.   

Abstract

Elongation factor Tu (EF-Tu) binds all elongator aminoacyl-transfer RNAs (aa-tRNAs) for delivery to the ribosome during protein synthesis. Here, we show that EF-Tu binds misacylated tRNAs over a much wider range of affinities than it binds the corresponding correctly acylated tRNAs, suggesting that the protein exhibits considerable specificity for both the amino acid side chain and the tRNA body. The thermodynamic contributions of the amino acid and the tRNA body to the overall binding affinity are independent of each other and compensate for one another when the tRNAs are correctly acylated. Because certain misacylated tRNAs bind EF-Tu significantly more strongly or weakly than cognate aa-tRNAs, EF-Tu may contribute to translational accuracy.

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Year:  2001        PMID: 11588263     DOI: 10.1126/science.1064242

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  132 in total

Review 1.  Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation.

Authors:  Christopher Francklyn; John J Perona; Joern Puetz; Ya-Ming Hou
Journal:  RNA       Date:  2002-11       Impact factor: 4.942

2.  A one-step method for in vitro production of tRNA transcripts.

Authors:  Dragana Korencić; Dieter Söll; Alexandre Ambrogelly
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

3.  In vitro selection for sense codon suppression.

Authors:  Adam Frankel; Richard W Roberts
Journal:  RNA       Date:  2003-07       Impact factor: 4.942

4.  Importance of the reverse Hoogsteen base pair 54-58 for tRNA function.

Authors:  Ekaterina I Zagryadskaya; Felix R Doyon; Sergey V Steinberg
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

5.  tRNA synthetase paralogs: evolutionary links in the transition from tRNA-dependent amino acid biosynthesis to de novo biosynthesis.

Authors:  Christopher Francklyn
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-11       Impact factor: 11.205

6.  Functional annotation of class I lysyl-tRNA synthetase phylogeny indicates a limited role for gene transfer.

Authors:  Alexandre Ambrogelly; Dragana Korencic; Michael Ibba
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

7.  No accident: genetic codes freeze in error-correcting patterns of the standard genetic code.

Authors:  David H Ardell; Guy Sella
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-11-29       Impact factor: 6.237

8.  Single amino acid changes in AspRS reveal alternative routes for expanding its tRNA repertoire in vivo.

Authors:  Franck Martin; Sharief Barends; Gilbert Eriani
Journal:  Nucleic Acids Res       Date:  2004-08-02       Impact factor: 16.971

9.  Atypical archaeal tRNA pyrrolysine transcript behaves towards EF-Tu as a typical elongator tRNA.

Authors:  Anne Théobald-Dietrich; Magali Frugier; Richard Giegé; Joëlle Rudinger-Thirion
Journal:  Nucleic Acids Res       Date:  2004-02-10       Impact factor: 16.971

Review 10.  Fine-tuning multiprotein complexes using small molecules.

Authors:  Andrea D Thompson; Amanda Dugan; Jason E Gestwicki; Anna K Mapp
Journal:  ACS Chem Biol       Date:  2012-07-23       Impact factor: 5.100

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