Literature DB >> 12913115

tRNA synthetase paralogs: evolutionary links in the transition from tRNA-dependent amino acid biosynthesis to de novo biosynthesis.

Christopher Francklyn1.   

Abstract

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Year:  2003        PMID： 12913115      PMCID： PMC187799          DOI： 10.1073/pnas.1934245100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  35 in total

Review 1.  The renaissance of aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Söll
Journal:  EMBO Rep       Date:  2001-05       Impact factor: 8.807

2.  Selection of tRNA by the ribosome requires a transition from an open to a closed form.

Authors:  James M Ogle; Frank V Murphy; Michael J Tarry; V Ramakrishnan
Journal:  Cell       Date:  2002-11-27       Impact factor: 41.582

Review 3.  Aminoacyl-tRNA synthesis: a postgenomic perspective.

Authors:  C Stathopoulos; I Ahel; K Ali; A Ambrogelly; H Becker; S Bunjun; L Feng; S Herring; C Jacquin-Becker; H Kobayashi; D Korencic; B Krett; N Mejlhede; B Min; H Nakano; S Namgoong; C Polycarpo; G Raczniak; J Rinehart; G Rosas-Sandoval; B Ruan; J Sabina; A Sauerwald; H Toogood; D Tumbula-Hansen; M Ibba; D Söll
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2001

4.  When contemporary aminoacyl-tRNA synthetases invent their cognate amino acid metabolism.

Authors:  Hervé Roy; Hubert Dominique Becker; Joseph Reinbolt; Daniel Kern
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-21       Impact factor: 11.205

5.  Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression.

Authors:  Wade Winkler; Ali Nahvi; Ronald R Breaker
Journal:  Nature       Date:  2002-10-16       Impact factor: 49.962

6.  Transfer RNA-dependent amino acid biosynthesis: an essential route to asparagine formation.

Authors:  Bokkee Min; Joanne T Pelaschier; David E Graham; Debra Tumbula-Hansen; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

7.  An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.

Authors:  Georges N Cohen; Valérie Barbe; Didier Flament; Michael Galperin; Roland Heilig; Odile Lecompte; Olivier Poch; Daniel Prieur; Joël Quérellou; Raymond Ripp; Jean-Claude Thierry; John Van der Oost; Jean Weissenbach; Yvan Zivanovic; Patrick Forterre
Journal:  Mol Microbiol       Date:  2003-03       Impact factor: 3.501

8.  V-shaped structure of glutamyl-tRNA reductase, the first enzyme of tRNA-dependent tetrapyrrole biosynthesis.

Authors:  J Moser; W D Schubert; V Beier; I Bringemeier; D Jahn; D W Heinz
Journal:  EMBO J       Date:  2001-12-03       Impact factor: 11.598

9.  Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA.

Authors:  Gayathri Srinivasan; Carey M James; Joseph A Krzycki
Journal:  Science       Date:  2002-05-24       Impact factor: 47.728

10.  Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation.

Authors:  F J LaRiviere; A D Wolfson; O C Uhlenbeck
Journal:  Science       Date:  2001-10-05       Impact factor: 47.728
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  11 in total

1.  Campylobacter jejuni adenosine triphosphate phosphoribosyltransferase is an active hexamer that is allosterically controlled by the twisting of a regulatory tail.

Authors:  Gerd Mittelstädt; Gert-Jan Moggré; Santosh Panjikar; Ali Reza Nazmi; Emily J Parker
Journal:  Protein Sci       Date:  2016-06-06       Impact factor: 6.725

2.  Identification and functional characterization of a novel bacterial type asparagine synthetase A: a tRNA synthetase paralog from Leishmania donovani.

Authors:  Reetika Manhas; Pankaj Tripathi; Sameena Khan; Bhavana Sethu Lakshmi; Shambhu Krishan Lal; Venkatraman Subramanian Gowri; Amit Sharma; Rentala Madhubala
Journal:  J Biol Chem       Date:  2014-03-07       Impact factor: 5.157

3.  β-Lysine discrimination by lysyl-tRNA synthetase.

Authors:  Marla S Gilreath; Hervé Roy; Tammy J Bullwinkle; Assaf Katz; William W Navarre; Michael Ibba
Journal:  FEBS Lett       Date:  2011-09-12       Impact factor: 4.124

4.  Chemotherapeutic efficacy of cucurmosin for pancreatic cancer as an alternative of gemcitabine: a comparative metabolomic study.

Authors:  Binbin Wei; Congfei Wang; Tianhong Teng; Pengfei Guo; Minghuang Chen; Feng Xia; Huili Liu; Jieming Xie; Jianghua Feng; Heguang Huang
Journal:  Gland Surg       Date:  2020-10

5.  Proteomic analysis of Apis cerana and Apis mellifera larvae fed with heterospecific royal jelly and by CSBV challenge.

Authors:  Yi Zhang; Guozhi Zhang; Xiu Huang; Richou Han
Journal:  PLoS One       Date:  2014-08-07       Impact factor: 3.240

6.  The place of RNA in the origin and early evolution of the genetic machinery.

Authors:  Günter Wächtershäuser
Journal:  Life (Basel)       Date:  2014-12-19

7.  The complex evolutionary history of aminoacyl-tRNA synthetases.

Authors:  Anargyros Chaliotis; Panayotis Vlastaridis; Dimitris Mossialos; Michael Ibba; Hubert D Becker; Constantinos Stathopoulos; Grigorios D Amoutzias
Journal:  Nucleic Acids Res       Date:  2017-02-17       Impact factor: 16.971

8.  Unusual domain architecture of aminoacyl tRNA synthetases and their paralogs from Leishmania major.

Authors:  V S Gowri; Indira Ghosh; Amit Sharma; Rentala Madhubala
Journal:  BMC Genomics       Date:  2012-11-14       Impact factor: 3.969

9.  Coevolution Theory of the Genetic Code at Age Forty: Pathway to Translation and Synthetic Life.

Authors:  J Tze-Fei Wong; Siu-Kin Ng; Wai-Kin Mat; Taobo Hu; Hong Xue
Journal:  Life (Basel)       Date:  2016-03-16

10.  Stereospecificity control in aminoacyl-tRNA-synthetases: new evidence of d-amino acids activation and editing.

Authors:  Mariia Yu Rybak; Alexey V Rayevsky; Olga I Gudzera; Michael A Tukalo
Journal:  Nucleic Acids Res       Date:  2019-10-10       Impact factor: 16.971
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