Literature DB >> 12458790

Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation.

Christopher Francklyn1, John J Perona, Joern Puetz, Ya-Ming Hou.   

Abstract

Aminoacyl-tRNA synthetases attach amino acids to the 3' termini of cognate tRNAs to establish the specificity of protein synthesis. A recent Asilomar conference (California, January 13-18, 2002) discussed new research into the structure-function relationship of these crucial enzymes, as well as a multitude of novel functions, including participation in amino acid biosynthesis, cell cycle control, RNA splicing, and export of tRNAs from nucleus to cytoplasm in eukaryotic cells. Together with the discovery of their role in the cellular synthesis of proteins to incorporate selenocysteine and pyrrolysine, these diverse functions of aminoacyl-tRNA synthetases underscore the flexibility and adaptability of these ancient enzymes and stimulate the development of new concepts and methods for expanding the genetic code.

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Year:  2002        PMID: 12458790      PMCID: PMC1370343          DOI: 10.1017/s1355838202021180

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  83 in total

1.  One polypeptide with two aminoacyl-tRNA synthetase activities.

Authors:  C Stathopoulos; T Li; R Longman; U C Vothknecht; H D Becker; M Ibba; D Söll
Journal:  Science       Date:  2000-01-21       Impact factor: 47.728

2.  Transfer RNA-dependent translocation of misactivated amino acids to prevent errors in protein synthesis.

Authors:  T K Nomanbhoy; T L Hendrickson; P Schimmel
Journal:  Mol Cell       Date:  1999-10       Impact factor: 17.970

3.  Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase.

Authors:  T Nakatsu; H Kato; J Oda
Journal:  Nat Struct Biol       Date:  1998-01

4.  Enzyme structure with two catalytic sites for double-sieve selection of substrate.

Authors:  O Nureki; D G Vassylyev; M Tateno; A Shimada; T Nakama; S Fukai; M Konno; T L Hendrickson; P Schimmel; S Yokoyama
Journal:  Science       Date:  1998-04-24       Impact factor: 47.728

5.  Proteobacterial histidine-biosynthetic pathways are paraphyletic.

Authors:  J P Bond; C Francklyn
Journal:  J Mol Evol       Date:  2000-04       Impact factor: 2.395

6.  L-arginine recognition by yeast arginyl-tRNA synthetase.

Authors:  J Cavarelli; B Delagoutte; G Eriani; J Gangloff; D Moras
Journal:  EMBO J       Date:  1998-09-15       Impact factor: 11.598

7.  Archaeal-type lysyl-tRNA synthetase in the Lyme disease spirochete Borrelia burgdorferi.

Authors:  M Ibba; J L Bono; P A Rosa; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-23       Impact factor: 11.205

8.  The 2 A crystal structure of leucyl-tRNA synthetase and its complex with a leucyl-adenylate analogue.

Authors:  S Cusack; A Yaremchuk; M Tukalo
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

9.  Species-specific differences in the operational RNA code for aminoacylation of tRNAPro.

Authors:  C Stehlin; B Burke; F Yang; H Liu; K Shiba; K Musier-Forsyth
Journal:  Biochemistry       Date:  1998-06-09       Impact factor: 3.162

10.  Glutamyl-tRNA(Gln) amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis.

Authors:  A W Curnow; D L Tumbula; J T Pelaschier; B Min; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-27       Impact factor: 11.205

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  34 in total

Review 1.  On the evolution of structure in aminoacyl-tRNA synthetases.

Authors:  Patrick O'Donoghue; Zaida Luthey-Schulten
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

2.  Kinetic partitioning between synthetic and editing pathways in class I aminoacyl-tRNA synthetases occurs at both pre-transfer and post-transfer hydrolytic steps.

Authors:  Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

3.  Horizontal gene transfer in aminoacyl-tRNA synthetases including leucine-specific subtypes.

Authors:  Juliane C Dohm; Martin Vingron; Eike Staub
Journal:  J Mol Evol       Date:  2006-09-04       Impact factor: 2.395

Review 4.  The coevolution of genes and genetic codes: Crick's frozen accident revisited.

Authors:  Guy Sella; David H Ardell
Journal:  J Mol Evol       Date:  2006-07-12       Impact factor: 2.395

5.  VEGF, not VEGFR2, is associated with the angiogenesis effect of mini-TyrRS/mini-TrpRS in human umbilical vein endothelial cells in hypoxia.

Authors:  Rui Zeng; Xiao-Fei Jiang; Yu-Cheng Chen; Yuan-Ning Xu; Song-Hong Ma; Zhi Zeng; Rui Liu; Ou Qiang; Xian Li
Journal:  Cytotechnology       Date:  2013-07-30       Impact factor: 2.058

6.  Evolutionary basis of converting a bacterial tRNA synthetase into a yeast cytoplasmic or mitochondrial enzyme.

Authors:  Wen-Chih Chiu; Chia-Pei Chang; Chien-Chia Wang
Journal:  J Biol Chem       Date:  2009-07-02       Impact factor: 5.157

7.  Purification, crystallization and preliminary X-ray characterization of a human mitochondrial phenylalanyl-tRNA synthetase.

Authors:  Inna Levin; Naama Kessler; Nina Moor; Liron Klipcan; Emine Koc; Paul Templeton; Linda Spremulli; Mark Safro
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-08-25

8.  Discrimination of cognate and noncognate substrates at the active site of class I lysyl-tRNA synthetase.

Authors:  Shiming Wang; Mette Praetorius-Ibba; Sandro F Ataide; Hervé Roy; Michael Ibba
Journal:  Biochemistry       Date:  2006-03-21       Impact factor: 3.162

9.  A tryptophan-rich peptide acts as a transcription activation domain.

Authors:  Chen-Huan Lin; Grace Lin; Chia-Pei Chang; Chien-Chia Wang
Journal:  BMC Mol Biol       Date:  2010-11-16       Impact factor: 2.946

10.  A genomic glimpse of aminoacyl-tRNA synthetases in malaria parasite Plasmodium falciparum.

Authors:  Tarun Kumar Bhatt; Charu Kapil; Sameena Khan; Mohamad Aman Jairajpuri; Vinay Sharma; Daniele Santoni; Francesco Silvestrini; Elisabetta Pizzi; Amit Sharma
Journal:  BMC Genomics       Date:  2009-12-31       Impact factor: 3.969

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