Literature DB >> 11473790

Alternative RNA splicing in the nervous system.

P J Grabowski1, D L Black.   

Abstract

Tissue-specific alternative splicing profoundly effects animal physiology, development and disease, and this is nowhere more evident than in the nervous system. Alternative splicing is a versatile form of genetic control whereby a common pre-mRNA is processed into multiple mRNA isoforms differing in their precise combination of exon sequences. In the nervous system, thousands of alternatively spliced mRNAs are translated into their protein counterparts where specific isoforms play roles in learning and memory, neuronal cell recognition, neurotransmission, ion channel function, and receptor specificity. The essential nature of this process is underscored by the finding that its misregulation is a common characteristic of human disease. This review highlights the current views of the biological phenomenon of alternative splicing, and describes evidence for its intricate underlying biochemical mechanisms. The roles of RNA binding proteins and their tissue-specific properties are discussed. Why does alternative splicing occur in cosmic proportions in the nervous system? How does it affect integrated cellular functions? How are region-specific, cell-specific and developmental differences in splicing directed? How are the control mechanisms that operate in the nervous system distinct from those of other tissues? Although there are many unanswered questions, substantial progress has been made in showing that alternative splicing is of major importance in generating proteomic diversity, and in modulating protein activities in a temporal and spatial manner. The relevance of alternative splicing to diseases of the nervous system is also discussed.

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Year:  2001        PMID: 11473790     DOI: 10.1016/s0301-0082(01)00007-7

Source DB:  PubMed          Journal:  Prog Neurobiol        ISSN: 0301-0082            Impact factor:   11.685


  115 in total

Review 1.  MRNA stability and the control of gene expression: implications for human disease.

Authors:  Elysia M Hollams; Keith M Giles; Andrew M Thomson; Peter J Leedman
Journal:  Neurochem Res       Date:  2002-10       Impact factor: 3.996

2.  Conserved sequence elements associated with exon skipping.

Authors:  Elana Miriami; Hanah Margalit; Ruth Sperling
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

3.  Genome-wide detection of tissue-specific alternative splicing in the human transcriptome.

Authors:  Qiang Xu; Barmak Modrek; Christopher Lee
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

4.  Minimal introns are not "junk".

Authors:  Jun Yu; Zhiyong Yang; Miho Kibukawa; Marcia Paddock; Douglas A Passey; Gane Ka-Shu Wong
Journal:  Genome Res       Date:  2002-08       Impact factor: 9.043

5.  Alternative splicing as a molecular switch for Ca2+/calmodulin-dependent facilitation of P/Q-type Ca2+ channels.

Authors:  Dipayan Chaudhuri; Siao-Yun Chang; Carla D DeMaria; Rebecca S Alvania; Tuck Wah Soong; David T Yue
Journal:  J Neurosci       Date:  2004-07-14       Impact factor: 6.167

6.  Ontogenomic study of the relationship between number of gene splice variants and GO categorization.

Authors:  Ari B Kahn; Barry R Zeeberg; Michael C Ryan; D Curtis Jamison; David M Rockoff; Yves Pommier; John N Weinstein
Journal:  Bioinformatics       Date:  2010-07-08       Impact factor: 6.937

Review 7.  Pre-mRNA splicing and retinitis pigmentosa.

Authors:  Daniel Mordes; Xiaoyan Luo; Amar Kar; David Kuo; Lili Xu; Kazuo Fushimi; Guowu Yu; Paul Sternberg; Jane Y Wu
Journal:  Mol Vis       Date:  2006-10-26       Impact factor: 2.367

8.  A consensus CaMK IV-responsive RNA sequence mediates regulation of alternative exons in neurons.

Authors:  Jiuyong Xie; Calvin Jan; Peter Stoilov; Jennifer Park; Douglas L Black
Journal:  RNA       Date:  2005-12       Impact factor: 4.942

9.  Posttranscriptional regulation of BK channel splice variant stability by miR-9 underlies neuroadaptation to alcohol.

Authors:  Andrzej Z Pietrzykowski; Ryan M Friesen; Gilles E Martin; Sylvie I Puig; Cheryl L Nowak; Patricia M Wynne; Hava T Siegelmann; Steven N Treistman
Journal:  Neuron       Date:  2008-07-31       Impact factor: 17.173

Review 10.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

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