Literature DB >> 12462398

MRNA stability and the control of gene expression: implications for human disease.

Elysia M Hollams1, Keith M Giles, Andrew M Thomson, Peter J Leedman.   

Abstract

Regulation of gene expression is essential for the homeostasis of an organism, playing a pivotal role in cellular proliferation, differentiation, and response to specific stimuli. Multiple studies over the last two decades have demonstrated that the modulation of mRNA stability plays an important role in regulating gene expression. The stability of a given mRNA transcript is determined by the presence of sequences within an mRNA known as cis-elements, which can be bound by trans-acting RNA-binding proteins to inhibit or enhance mRNA decay. These cis-trans interactions are subject to a control by a wide variety of factors including hypoxia, hormones, and cytokines. In this review, we describe mRNA biosynthesis and degradation, and detail the cis-elements and RNA-binding proteins known to affect mRNA turnover. We present recent examples in which dysregulation of mRNA stability has been associated with human diseases including cancer, inflammatory disease, and Alzheimer's disease.

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Year:  2002        PMID: 12462398     DOI: 10.1023/a:1020992418511

Source DB:  PubMed          Journal:  Neurochem Res        ISSN: 0364-3190            Impact factor:   3.996


  335 in total

1.  Embryonic lethal abnormal vision-like RNA-binding proteins regulate neurite outgrowth and tau expression in PC12 cells.

Authors:  G E Aranda-Abreu; L Behar; S Chung; H Furneaux; I Ginzburg
Journal:  J Neurosci       Date:  1999-08-15       Impact factor: 6.167

2.  Assays for analyzing exonucleases in vitro.

Authors:  J Ross
Journal:  Methods       Date:  1999-01       Impact factor: 3.608

3.  Assaying the polyadenylation state of mRNAs.

Authors:  F J Sallés; W G Richards; S Strickland
Journal:  Methods       Date:  1999-01       Impact factor: 3.608

4.  A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex.

Authors:  C Grosset; C Y Chen; N Xu; N Sonenberg; H Jacquemin-Sablon; A B Shyu
Journal:  Cell       Date:  2000-09-29       Impact factor: 41.582

5.  The exosome of Trypanosoma brucei.

Authors:  A M Estévez; T Kempf; C Clayton
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

6.  Characterization of c-myc 3' to 5' mRNA decay activities in an in vitro system.

Authors:  G Brewer
Journal:  J Biol Chem       Date:  1998-12-25       Impact factor: 5.157

7.  Recognition of polyadenylate RNA by the poly(A)-binding protein.

Authors:  R C Deo; J B Bonanno; N Sonenberg; S K Burley
Journal:  Cell       Date:  1999-09-17       Impact factor: 41.582

8.  AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: the functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A).

Authors:  C A Lagnado; C Y Brown; G J Goodall
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

9.  p21(waf1) mRNA contains a conserved element in its 3'-untranslated region that is bound by the Elav-like mRNA-stabilizing proteins.

Authors:  B Joseph; M Orlian; H Furneaux
Journal:  J Biol Chem       Date:  1998-08-07       Impact factor: 5.157

10.  The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism.

Authors:  P Mitchell; E Petfalski; D Tollervey
Journal:  Genes Dev       Date:  1996-02-15       Impact factor: 11.361

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  71 in total

1.  RNA processing and modification protein, carbon catabolite repression 4 (Ccr4), arrests the cell cycle through p21-dependent and p53-independent pathway.

Authors:  Xia Yi; Mei Hong; Bin Gui; Zhe Chen; Lei Li; Guojia Xie; Jing Liang; Xiaocheng Wang; Yongfeng Shang
Journal:  J Biol Chem       Date:  2012-04-30       Impact factor: 5.157

Review 2.  Inflammation: cytokines and RNA-based regulation.

Authors:  Deborah J Stumpo; Wi S Lai; Perry J Blackshear
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-05-06       Impact factor: 9.957

Review 3.  Regulation of cell junction dynamics by cytokines in the testis: a molecular and biochemical perspective.

Authors:  Wing-Yee Lui; C Yan Cheng
Journal:  Cytokine Growth Factor Rev       Date:  2007-05-22       Impact factor: 7.638

4.  Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of XC847, a 3'-5' oligoribonuclease from Xanthomonas campestris.

Authors:  Yan-You Wu; Ko-Hsin Chin; Chia-Cheng Chou; Cheng-Chung Lee; Hui-Lin Shr; Fei Philip Gao; Ping-Chiang Lyu; Andrew H-J Wang; Shan-Ho Chou
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-09-30

5.  Protein kinase C alpha-dependent phosphorylation of the mRNA-stabilizing factor HuR: implications for posttranscriptional regulation of cyclooxygenase-2.

Authors:  Anke Doller; Andrea Huwiler; Roswitha Müller; Heinfried H Radeke; Josef Pfeilschifter; Wolfgang Eberhardt
Journal:  Mol Biol Cell       Date:  2007-03-28       Impact factor: 4.138

6.  Glucocorticoid regulation of human pulmonary surfactant protein-B mRNA stability involves the 3'-untranslated region.

Authors:  Helen W Huang; Weizhen Bi; Gaye N Jenkins; Joseph L Alcorn
Journal:  Am J Respir Cell Mol Biol       Date:  2007-11-15       Impact factor: 6.914

7.  Crystal structure of human Edc3 and its functional implications.

Authors:  Sharon H M Ling; Carolyn J Decker; Martin A Walsh; Meipei She; Roy Parker; Haiwei Song
Journal:  Mol Cell Biol       Date:  2008-08-04       Impact factor: 4.272

8.  A functional link between heme oxygenase-1 and tristetraprolin in the anti-inflammatory effects of nicotine.

Authors:  Md Jamal Uddin; Yeonsoo Joe; Min Zheng; Perry J Blackshear; Stefan W Ryter; Jeong Woo Park; Hun Taeg Chung
Journal:  Free Radic Biol Med       Date:  2013-10-02       Impact factor: 7.376

9.  Formation of an alphaCP1-KH3 complex with UC-rich RNA.

Authors:  M Sidiqi; J A Wilce; C J Porter; A Barker; P J Leedman; M C J Wilce
Journal:  Eur Biophys J       Date:  2005-03-09       Impact factor: 1.733

10.  Tandem phosphorylation of serines 221 and 318 by protein kinase Cdelta coordinates mRNA binding and nucleocytoplasmic shuttling of HuR.

Authors:  Anke Doller; Kai Schlepckow; Harald Schwalbe; Josef Pfeilschifter; Wolfgang Eberhardt
Journal:  Mol Cell Biol       Date:  2010-01-19       Impact factor: 4.272

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