Literature DB >> 11416159

Short tandem repeat profiling provides an international reference standard for human cell lines.

J R Masters1, J A Thomson, B Daly-Burns, Y A Reid, W G Dirks, P Packer, L H Toji, T Ohno, H Tanabe, C F Arlett, L R Kelland, M Harrison, A Virmani, T H Ward, K L Ayres, P G Debenham.   

Abstract

Cross-contamination between cell lines is a longstanding and frequent cause of scientific misrepresentation. Estimates from national testing services indicate that up to 36% of cell lines are of a different origin or species to that claimed. To test a standard method of cell line authentication, 253 human cell lines from banks and research institutes worldwide were analyzed by short tandem repeat profiling. The short tandem repeat profile is a simple numerical code that is reproducible between laboratories, is inexpensive, and can provide an international reference standard for every cell line. If DNA profiling of cell lines is accepted and demanded internationally, scientific misrepresentation because of cross-contamination can be largely eliminated.

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Year:  2001        PMID: 11416159      PMCID: PMC35459          DOI: 10.1073/pnas.121616198

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Validation of short tandem repeat analysis for the investigation of cases of disputed paternity.

Authors:  J A Thomson; V Pilotti; P Stevens; K L Ayres; P G Debenham
Journal:  Forensic Sci Int       Date:  1999-03-15       Impact factor: 2.395

2.  Results of species-specific hemagglutination tests on "transformed," nontransformed, and primary cell cultures.

Authors:  K G BRAND; J T SYVERTON
Journal:  J Natl Cancer Inst       Date:  1962-01       Impact factor: 13.506

3.  Immunological and karyological criteria for identification of cell lines.

Authors:  V DEFENDI; R E BILLINGHAM; W K SILVERS; P MOORHEAD
Journal:  J Natl Cancer Inst       Date:  1960-08       Impact factor: 13.506

4.  DNA fingerprinting transforms the art of cell authentication.

Authors:  G N Stacey; B J Bolton; A Doyle
Journal:  Nature       Date:  1992-05-21       Impact factor: 49.962

5.  Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat.

Authors:  B Brinkmann; M Klintschar; F Neuhuber; J Hühne; B Rolf
Journal:  Am J Hum Genet       Date:  1998-06       Impact factor: 11.025

6.  Development and population study of an eight-locus short tandem repeat (STR) multiplex system.

Authors:  A M Lins; K A Micka; C J Sprecher; J A Taylor; J W Bacher; D R Rabbach; R A Bever; S D Creacy; J W Schumm
Journal:  J Forensic Sci       Date:  1998-11       Impact factor: 1.832

7.  Cell line designation change: multidrug-resistant cell line in the NCI anticancer screen.

Authors:  D A Scudiero; A Monks; E A Sausville
Journal:  J Natl Cancer Inst       Date:  1998-06-03       Impact factor: 13.506

8.  Sensitivity of isoenzyme analysis for the detection of interspecies cell line cross-contamination.

Authors:  R W Nims; A P Shoemaker; M A Bauernschub; L J Rec; J W Harbell
Journal:  In Vitro Cell Dev Biol Anim       Date:  1998-01       Impact factor: 2.416

9.  Widespread intraspecies cross-contamination of human tumor cell lines arising at source.

Authors:  R A MacLeod; W G Dirks; Y Matsuo; M Kaufmann; H Milch; H G Drexler
Journal:  Int J Cancer       Date:  1999-11-12       Impact factor: 7.396

10.  A highly discriminating octoplex short tandem repeat polymerase chain reaction system suitable for human individual identification.

Authors:  N J Oldroyd; A J Urquhart; C P Kimpton; E S Millican; S K Watson; T Downes; P D Gill
Journal:  Electrophoresis       Date:  1995-03       Impact factor: 3.535

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  187 in total

1.  Cell culture forensics.

Authors:  S J O'Brien
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

2.  National Cancer Institute pediatric preclinical testing program: model description for in vitro cytotoxicity testing.

Authors:  Min H Kang; Malcolm A Smith; Christopher L Morton; Nino Keshelava; Peter J Houghton; C Patrick Reynolds
Journal:  Pediatr Blood Cancer       Date:  2010-10-04       Impact factor: 3.167

3.  Synergistic activity of fenretinide and the Bcl-2 family protein inhibitor ABT-737 against human neuroblastoma.

Authors:  Hua Fang; Theresa M Harned; Ondrej Kalous; Vanessa Maldonado; Yves A DeClerck; C Patrick Reynolds
Journal:  Clin Cancer Res       Date:  2011-09-20       Impact factor: 12.531

4.  A simple method using beta-globin polymerase chain reaction for the species identification of animal cell lines--a progress report.

Authors:  Klaus G Steube; Corinna Meyer; Cord C Uphoff; Hans G Drexler
Journal:  In Vitro Cell Dev Biol Anim       Date:  2003 Nov-Dec       Impact factor: 2.416

5.  Bladder carcinoma cell line ECV304 is not a model system for endothelial cells.

Authors:  Hans G Drexler; Hilmar Quentmeier; Wilhelm G Dirks; Roderick A F MacLeod
Journal:  In Vitro Cell Dev Biol Anim       Date:  2002-04       Impact factor: 2.416

6.  Synergistic activity of rapamycin and dexamethasone in vitro and in vivo in acute lymphoblastic leukemia via cell-cycle arrest and apoptosis.

Authors:  Chong Zhang; Yong-Ku Ryu; Taylor Z Chen; Connor P Hall; Daniel R Webster; Min H Kang
Journal:  Leuk Res       Date:  2011-12-03       Impact factor: 3.156

7.  Quality of Cell Products: Authenticity, Identity, Genomic Stability and Status of Differentiation.

Authors:  Kurt E J Dittmar; Meike Simann; Nadia Zghoul; Oliver Schön; Wilhelm Meyring; Horst Hannig; Lars Macke; Wilhelm G Dirks; Konstantin Miller; Henk S P Garritsen; Werner Lindenmaier
Journal:  Transfus Med Hemother       Date:  2010-03-08       Impact factor: 3.747

Review 8.  Cell line misidentification: the beginning of the end.

Authors: 
Journal:  Nat Rev Cancer       Date:  2010-05-07       Impact factor: 60.716

9.  Quality standards in Biobanking: authentication by genetic profiling of blood spots from donor's original sample.

Authors:  Sergio Cardoso; Laura Valverde; Adrian Odriozola; Xabier Elcoroaristizabal; Marian M de Pancorbo
Journal:  Eur J Hum Genet       Date:  2010-03-17       Impact factor: 4.246

10.  Discovery of HeLa Cell Contamination in HES Cells: Call for Cell Line Authentication in Reproductive Biology Research.

Authors:  Douglas A Kniss; Taryn L Summerfield
Journal:  Reprod Sci       Date:  2014-02-11       Impact factor: 3.060

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