Literature DB >> 20234395

Quality standards in Biobanking: authentication by genetic profiling of blood spots from donor's original sample.

Sergio Cardoso1, Laura Valverde, Adrian Odriozola, Xabier Elcoroaristizabal, Marian M de Pancorbo.   

Abstract

The field of Biobanking requires extensive work to maintain traceability of samples. However, sometimes the necessity to authenticate a sample may arise. To address these circumstances, we herein present a method for authenticating derivatives by using a blood spot from each donor, attached to a sample authentication form, by means of genetic profiling. Blood spots are collected at the time a blood sample is donated at a health centre and before processing the blood sample at the biobank. To test the validity of our approach over time, we analyzed 26 blood spots stored at room temperature in our facilities for more than 15 years. DNA was successfully extracted from the three storage materials tested in this study and 15 STR markers plus amelogenin were subsequently analyzed. The storage of a small blood spot attached to a sample authentication form proved to be efficient for genetic profiling and, therefore, may constitute a long-lasting (at least 15 years), cost-effective and effortless approach for genetic authentication of samples in biobanks.

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Year:  2010        PMID: 20234395      PMCID: PMC2987351          DOI: 10.1038/ejhg.2010.16

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  11 in total

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Authors:  J Gómez; A Carracedo
Journal:  Forensic Sci Int       Date:  2000-10-09       Impact factor: 2.395

2.  Short tandem repeat profiling provides an international reference standard for human cell lines.

Authors:  J R Masters; J A Thomson; B Daly-Burns; Y A Reid; W G Dirks; P Packer; L H Toji; T Ohno; H Tanabe; C F Arlett; L R Kelland; M Harrison; A Virmani; T H Ward; K L Ayres; P G Debenham
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

3.  Constructing universal multiplex PCR systems for comparative genotyping.

Authors:  Jeanette M Wallin; Cydne L Holt; Katherine D Lazaruk; Theresa H Nguyen; P Sean Walsh
Journal:  J Forensic Sci       Date:  2002-01       Impact factor: 1.832

4.  DNA fingerprinting transforms the art of cell authentication.

Authors:  G N Stacey; B J Bolton; A Doyle
Journal:  Nature       Date:  1992-05-21       Impact factor: 49.962

Review 5.  Genetics and genomics of core short tandem repeat loci used in human identity testing.

Authors:  John M Butler
Journal:  J Forensic Sci       Date:  2006-03       Impact factor: 1.832

6.  Profiling and authentication of human cell lines using short tandem repeat (STR) loci: Report from the National Cell Bank of Iran.

Authors:  Shahram Azari; Nahid Ahmadi; Mahmood Jeddi Tehrani; Fazel Shokri
Journal:  Biologicals       Date:  2007-01-24       Impact factor: 1.856

7.  Application of DNA fingerprints for cell-line individualization.

Authors:  D A Gilbert; Y A Reid; M H Gail; D Pee; C White; R J Hay; S J O'Brien
Journal:  Am J Hum Genet       Date:  1990-09       Impact factor: 11.025

8.  [DNA prints instead of plantar prints in neonatal identification].

Authors:  J Rodríguez-Alarcón Gómez; M Martińez de Pancorbo Gómez; L Santillana Ferrer; A Castro Espido; J C Melchor Maros; M A Linares Uribe; L Fernández-Llebrez del Rey; G Aranguren Dúo
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Review 9.  The utility of short tandem repeat loci beyond human identification: implications for development of new DNA typing systems.

Authors:  R Chakraborty; D N Stivers; B Su; Y Zhong; B Budowle
Journal:  Electrophoresis       Date:  1999-06       Impact factor: 3.535

10.  Biobanks: transnational, European and global networks.

Authors:  Martin Asslaber; Kurt Zatloukal
Journal:  Brief Funct Genomic Proteomic       Date:  2007-10-04
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  6 in total

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2.  Sample Confirmation Testing: A Short Tandem Repeat-Based Quality Assurance and Quality Control Procedure for the eyeGENE Biorepository.

Authors:  Rebecca S Parrish; Alexandra V Garafalo; Vida Ndifor; Kerry E Goetz; Melissa J Reeves; Annette Yim; Remy C Cooper; Jemma Iano-Fletcher; Xinjing Wang; Santa J Tumminia
Journal:  Biopreserv Biobank       Date:  2016-02-18       Impact factor: 2.300

Review 3.  A critical analysis of cancer biobank practices in relation to biospecimen quality.

Authors:  Amanda Rush; Kevin Spring; Jennifer A Byrne
Journal:  Biophys Rev       Date:  2015-10-22

4.  Cell lines authentication and mycoplasma detection as minimun quality control of cell lines in biobanking.

Authors:  C Corral-Vázquez; R Aguilar-Quesada; P Catalina; G Lucena-Aguilar; G Ligero; B Miranda; J A Carrillo-Ávila
Journal:  Cell Tissue Bank       Date:  2017-03-02       Impact factor: 1.522

5.  Microsatellite Markers in Biobanking: A New Multiplexed Assay.

Authors:  Gretchen Smith; Debra Mathews; Samuel Sander-Effron; Deborah Requesens; Nahid Turan; Laura Scheinfeldt
Journal:  Biopreserv Biobank       Date:  2021-09-01       Impact factor: 2.300

6.  Human sample authentication in biomedical research: comparison of two platforms.

Authors:  Harshitha Shobha Manjunath; Nicola James; Rebecca Mathew; Muna Al Hashmi; Lee Silcock; Ida Biunno; Pasquale De Blasio; Chidambaram Manickam; Sara Tomei
Journal:  Sci Rep       Date:  2021-07-07       Impact factor: 4.379

  6 in total

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