Literature DB >> 9846394

Development and population study of an eight-locus short tandem repeat (STR) multiplex system.

A M Lins1, K A Micka, C J Sprecher, J A Taylor, J W Bacher, D R Rabbach, R A Bever, S D Creacy, J W Schumm.   

Abstract

Amplification of short tandem repeat (STR) loci has become a useful tool for human identification applications. To improve throughput and efficiency for such uses, the polymorphic STR loci CSF1PO, TPOX, TH01, vWA, D16S539, D7S820, D13S317, D5S818, F13A01, FESFPS, F13B, and LPL have been evaluated, developed, and configured into fluorescently labeled multiplex systems. Eight of these STR loci were combined to generate the PowerPlex System, a two-color multiplex system that supports rapid, accurate, reliable analysis and designation of alleles. The remaining four loci comprise the FFFL System, a one-color multiplex system. The PowerPlex System may be evaluated alternatively as two one-color, four-locus multiplex systems, CTTv Multiplex and GammaSTR Multiplex. The products of multiplex amplification may be analyzed with a variety of fluorescence detection instruments. Determination of genotypes of over 200 individuals from each of three different population/ethnic groups revealed independence of inheritance of the loci and allowed calculation of matching probability, typical paternity index, and power of exclusion for each multiplex.

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Year:  1998        PMID: 9846394

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  12 in total

1.  Short tandem repeat profiling provides an international reference standard for human cell lines.

Authors:  J R Masters; J A Thomson; B Daly-Burns; Y A Reid; W G Dirks; P Packer; L H Toji; T Ohno; H Tanabe; C F Arlett; L R Kelland; M Harrison; A Virmani; T H Ward; K L Ayres; P G Debenham
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

2.  High-efficiency derivation of human embryonic stem cell lines following pre-implantation genetic diagnosis.

Authors:  Philippe Tropel; Johana Tournois; Julien Côme; Christine Varela; Céline Moutou; Pascal Fragner; Michel Cailleret; Yacine Laâbi; Marc Peschanski; Stéphane Viville
Journal:  In Vitro Cell Dev Biol Anim       Date:  2010-03-09       Impact factor: 2.416

3.  Tri-allelic patterns at the D7S820 locus detected in two generations of a Chinese family.

Authors:  Erlie Jiang; Jie Pan; Mingzhe Han; Liang Chen; Qiaoling Ma; Jialin Wei; Yong Huang; Sizhou Feng; Qin Sun; Peili Xiao; Zhongzheng Zheng
Journal:  Int J Legal Med       Date:  2015-03-25       Impact factor: 2.686

4.  Raloxifene-stimulated experimental breast cancer with the paradoxical actions of estrogen to promote or prevent tumor growth: a unifying concept in anti-hormone resistance.

Authors:  Gregor M Balaburski; Rita C Dardes; Michael Johnson; Bassem Haddad; Fang Zhu; Eric A Ross; Surojeet Sengupta; Andres Klein-Szanto; Hong Liu; Eun Sook Lee; Helen Kim; V Craig Jordan
Journal:  Int J Oncol       Date:  2010-08       Impact factor: 5.650

5.  High-throughput SNP-based authentication of human cell lines.

Authors:  Felipe Castro; Wilhelm G Dirks; Silke Fähnrich; Agnes Hotz-Wagenblatt; Michael Pawlita; Markus Schmitt
Journal:  Int J Cancer       Date:  2012-06-28       Impact factor: 7.396

Review 6.  Authenticating cell lines in ophthalmic research laboratories.

Authors:  Robert Folberg; Shrihari S Kadkol; Shahar Frenkel; Klara Valyi-Nagy; Martine J Jager; Jacob Pe'er; Andrew J Maniotis
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-08-08       Impact factor: 4.799

7.  Sequence variation of 22 autosomal STR loci detected by next generation sequencing.

Authors:  Katherine Butler Gettings; Kevin M Kiesler; Seth A Faith; Elizabeth Montano; Christine H Baker; Brian A Young; Richard A Guerrieri; Peter M Vallone
Journal:  Forensic Sci Int Genet       Date:  2015-12-01       Impact factor: 4.882

8.  Forensic trace DNA: a review.

Authors:  Roland Ah van Oorschot; Kaye N Ballantyne; R John Mitchell
Journal:  Investig Genet       Date:  2010-12-01

9.  A molecular scheme for improved characterization of human embryonic stem cell lines.

Authors:  Richard Josephson; Gregory Sykes; Ying Liu; Carol Ording; Weining Xu; Xianmin Zeng; Soojung Shin; Jeanne Loring; Anirban Maitra; Mahendra S Rao; Jonathan M Auerbach
Journal:  BMC Biol       Date:  2006-08-18       Impact factor: 7.431

10.  Genetic profiling reveals cross-contamination and misidentification of 6 adenoid cystic carcinoma cell lines: ACC2, ACC3, ACCM, ACCNS, ACCS and CAC2.

Authors:  Janyaporn Phuchareon; Yoshihito Ohta; Jonathan M Woo; David W Eisele; Osamu Tetsu
Journal:  PLoS One       Date:  2009-06-25       Impact factor: 3.240

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