Literature DB >> 9585597

Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat.

B Brinkmann1, M Klintschar, F Neuhuber, J Hühne, B Rolf.   

Abstract

In 10,844 parent/child allelic transfers at nine short-tandem-repeat (STR) loci, 23 isolated STR mismatches were observed. The parenthood in each of these cases was highly validated (probability >99.97%). The event was always repeat related, owing to either a single-step mutation (n=22) or a double-step mutation (n=1). The mutation rate was between 0 and 7 x 10(-3) per locus per gamete per generation. No mutations were observed in three of the nine loci. Mutation events in the male germ line were five to six times more frequent than in the female germ line. A positive exponential correlation between the geometric mean of the number of uninterrupted repeats and the mutation rate was observed. Our data demonstrate that mutation rates of different loci can differ by several orders of magnitude and that different alleles at one locus exhibit different mutation rates.

Entities:  

Mesh:

Year:  1998        PMID: 9585597      PMCID: PMC1377148          DOI: 10.1086/301869

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  42 in total

1.  Structural variation in the alleles of a short tandem repeat system at the human alpha fibrinogen locus.

Authors:  M D Barber; B J McKeown; B H Parkin
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

2.  Population genetic comparisons among eight populations using allele frequency and sequence data from three microsatellite loci.

Authors:  B Brinkmann; A Sajantila; H W Goedde; H Matsumoto; K Nishi; P Wiegand
Journal:  Eur J Hum Genet       Date:  1996       Impact factor: 4.246

3.  Complex mutational events at the HumD21S11 locus.

Authors:  B Brinkmann; E Meyer; A Junge
Journal:  Hum Genet       Date:  1996-07       Impact factor: 4.132

4.  Allelic diversity in alligator microsatellite loci is negatively correlated with GC content of flanking sequences and evolutionary conservation of PCR amplifiability.

Authors:  T C Glenn; W Stephan; H C Dessauer; M J Braun
Journal:  Mol Biol Evol       Date:  1996-10       Impact factor: 16.240

Review 5.  Repeat offenders: simple repeat sequences and complex genetic problems.

Authors:  R I Richards; G R Sutherland
Journal:  Hum Mutat       Date:  1996       Impact factor: 4.878

6.  Phenotype differences of STRs in 7 human populations.

Authors:  E Meyer; P Wiegand; B Brinkmann
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

7.  HumFES/FPS and HumF13B: Turkish and German population data.

Authors:  B Alper; E Meyer; M Schürenkamp; B Brinkmann
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

8.  Lack of effects of atomic bomb radiation on genetic instability of tandem-repetitive elements in human germ cells.

Authors:  M Kodaira; C Satoh; K Hiyama; K Toyama
Journal:  Am J Hum Genet       Date:  1995-12       Impact factor: 11.025

9.  Microsatellite polymorphisms reveal phylogenetic relationships in primates.

Authors:  E Meyer; P Wiegand; S P Rand; D Kuhlmann; M Brack; B Brinkmann
Journal:  J Mol Evol       Date:  1995-07       Impact factor: 2.395

10.  Human minisatellite mutation rate after the Chernobyl accident.

Authors:  Y E Dubrova; V N Nesterov; N G Krouchinsky; V A Ostapenko; R Neumann; D L Neil; A J Jeffreys
Journal:  Nature       Date:  1996-04-25       Impact factor: 49.962

View more
  192 in total

1.  Biological significance of microsatellite instability-low (MSI-L) status in colorectal tumors.

Authors:  J R Jass; J Young; B A Leggett
Journal:  Am J Pathol       Date:  2001-02       Impact factor: 4.307

2.  Compound microsatellite repeats: practical and theoretical features.

Authors:  L N Bull; C R Pabón-Peña; N B Freimer
Journal:  Genome Res       Date:  1999-09       Impact factor: 9.043

3.  Characteristics and frequency of germline mutations at microsatellite loci from the human Y chromosome, as revealed by direct observation in father/son pairs.

Authors:  M Kayser; L Roewer; M Hedman; L Henke; J Henke; S Brauer; C Krüger; M Krawczak; M Nagy; T Dobosz; R Szibor; P de Knijff; M Stoneking; A Sajantila
Journal:  Am J Hum Genet       Date:  2000-04-06       Impact factor: 11.025

4.  Microsatellite mutations and inferences about human demography.

Authors:  R Gonser; P Donnelly; G Nicholson; A Di Rienzo
Journal:  Genetics       Date:  2000-04       Impact factor: 4.562

5.  Haplotype fine mapping by evolutionary trees.

Authors:  J C Lam; K Roeder; B Devlin
Journal:  Am J Hum Genet       Date:  2000-02       Impact factor: 11.025

6.  Evidence for effective suppression of recombination in the chromosome 17q21 segment spanning RNU2-BRCA1.

Authors:  X Liu; D F Barker
Journal:  Am J Hum Genet       Date:  1999-05       Impact factor: 11.025

7.  Extent and distribution of linkage disequilibrium in three genomic regions.

Authors:  G R Abecasis; E Noguchi; A Heinzmann; J A Traherne; S Bhattacharyya; N I Leaves; G G Anderson; Y Zhang; N J Lench; A Carey; L R Cardon; M F Moffatt; W O Cookson
Journal:  Am J Hum Genet       Date:  2000-11-13       Impact factor: 11.025

8.  Mutation patterns at dinucleotide microsatellite loci in humans.

Authors:  Qing-Yang Huang; Fu-Hua Xu; Hui Shen; Hong-Yi Deng; Yong-Jun Liu; Yao-Zhong Liu; Jin-Long Li; Robert R Recker; Hong-Wen Deng
Journal:  Am J Hum Genet       Date:  2002-01-15       Impact factor: 11.025

9.  Short tandem repeat profiling provides an international reference standard for human cell lines.

Authors:  J R Masters; J A Thomson; B Daly-Burns; Y A Reid; W G Dirks; P Packer; L H Toji; T Ohno; H Tanabe; C F Arlett; L R Kelland; M Harrison; A Virmani; T H Ward; K L Ayres; P G Debenham
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

10.  A microsatellite-based multilocus screen for the identification of local selective sweeps.

Authors:  Christian Schlötterer
Journal:  Genetics       Date:  2002-02       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.