Literature DB >> 11389936

Failure in identification of overlapping spikes from multiple neuron activity causes artificial correlations.

I Bar-Gad1, Y Ritov, E Vaadia, H Bergman.   

Abstract

Recording of multiple neurons from a single electrode is common practice during extra-cellular recordings. Separation and sorting of spikes originating from the different neurons can be performed either on-line or off-line using multiple methods for pattern matching. However, all spike sorting techniques fail either fully or partially in identifying spikes from multiple neurons when they overlap due to occurrence within a short time interval. This failure, that we termed the 'shadowing effect', causes the well-known phenomenon of decreased cross-correlation at zero offset. However, the shadowing effect also causes other artifacts in the auto and cross-correlation of the recorded neurons. These artifacts are significant mainly in brain areas with high firing rate or increased firing synchrony leading to a high probability of spike overlap. Cross correlation of cells recorded from the same electrodes tends to reflect the autocorrelation functions of the two cells, even when there are no functional interactions between the cells. Therefore, the cross-correlation function tends to have a short-term (about the length of the refractory period) peak. A long-term (hundreds of milliseconds to a few seconds) trough in the cross-correlation can be seen in cells with bursting and pausing activities recorded from the same electrode. Even the autocorrelation functions of the recorded neurons feature firing properties of other neurons recorded from the same electrode. Examples of these effects are given from our recordings in the globus pallidus of behaving primates and from the literature. Results of simulations of independent simple model neurons exhibit the same properties as the recorded neurons. The effect is analyzed and can be estimated to enable better evaluation of the underlying firing patterns and the actual synchronization of neighboring neurons recorded by a single electrode.

Mesh:

Year:  2001        PMID: 11389936     DOI: 10.1016/s0165-0270(01)00339-9

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  27 in total

1.  Robustness of the significance of spike synchrony with respect to sorting errors.

Authors:  Antonio Pazienti; Sonja Grün
Journal:  J Comput Neurosci       Date:  2006-08-14       Impact factor: 1.621

Review 2.  Recent progress in multi-electrode spike sorting methods.

Authors:  Baptiste Lefebvre; Pierre Yger; Olivier Marre
Journal:  J Physiol Paris       Date:  2017-03-02

3.  Automated spike sorting using density grid contour clustering and subtractive waveform decomposition.

Authors:  Carlos Vargas-Irwin; John P Donoghue
Journal:  J Neurosci Methods       Date:  2007-04-12       Impact factor: 2.390

4.  Transient neuronal correlations underlying goal selection and maintenance in prefrontal cortex.

Authors:  Satoshi Tsujimoto; Aldo Genovesio; Steven P Wise
Journal:  Cereb Cortex       Date:  2008-03-20       Impact factor: 5.357

Review 5.  Data-driven significance estimation for precise spike correlation.

Authors:  Sonja Grün
Journal:  J Neurophysiol       Date:  2009-01-07       Impact factor: 2.714

6.  Medial Prefrontal Cortex Population Activity Is Plastic Irrespective of Learning.

Authors:  Abhinav Singh; Adrien Peyrache; Mark D Humphries
Journal:  J Neurosci       Date:  2019-02-27       Impact factor: 6.167

7.  Analysis of spontaneous activity of superficial dorsal horn neurons in vitro: neuropathy-induced changes.

Authors:  Carolina Roza; Irene Mazo; Iván Rivera-Arconada; Elsa Cisneros; Ismel Alayón; José A López-García
Journal:  Pflugers Arch       Date:  2016-10-10       Impact factor: 3.657

8.  Dopamine replacement therapy reverses abnormal synchronization of pallidal neurons in the 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine primate model of parkinsonism.

Authors:  Gali Heimer; Izhar Bar-Gad; Joshua A Goldberg; Hagai Bergman
Journal:  J Neurosci       Date:  2002-09-15       Impact factor: 6.167

9.  Spike sorting of synchronous spikes from local neuron ensembles.

Authors:  Felix Franke; Robert Pröpper; Henrik Alle; Philipp Meier; Jörg R P Geiger; Klaus Obermayer; Matthias H J Munk
Journal:  J Neurophysiol       Date:  2015-08-19       Impact factor: 2.714

10.  A new method to infer higher-order spike correlations from membrane potentials.

Authors:  Imke C G Reimer; Benjamin Staude; Clemens Boucsein; Stefan Rotter
Journal:  J Comput Neurosci       Date:  2013-03-10       Impact factor: 1.621

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.