Literature DB >> 11333227

Protosilencers in Saccharomyces cerevisiae subtelomeric regions.

E Lebrun1, E Revardel, C Boscheron, R Li, E Gilson, G Fourel.   

Abstract

Saccharomyces cerevisiae subtelomeric repeats contain silencing elements such as the core X sequence, which is present at all chromosome ends. When transplaced at HML, core X can enhance the action of a distant silencer without acting as a silencer on its own, thus fulfilling the functional definition of a protosilencer. Here we show that an ACS motif and an Abf1p-binding site participate in the silencing capacity of core X and that their effects are additive. In addition, in a variety of settings, core X was found to bring about substantial gene repression only when a low level of silencing was already detectable in its absence. Adjoining an X-STAR sequence, which naturally abuts core X in subtelomeric regions, did not improve the silencing capacity of core X. We propose that protosilencers play a major role in a variety of silencing phenomena, as is the case for core X, which acts as a silencing relay, prolonging silencing propagation away from telomeres.

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Year:  2001        PMID: 11333227      PMCID: PMC1461618     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  46 in total

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Authors:  G Fourel; C Boscheron; E Revardel; E Lebrun; Y F Hu; K C Simmen; K Müller; R Li; N Mermod; E Gilson
Journal:  EMBO Rep       Date:  2001-02       Impact factor: 8.807

2.  H19 and Igf2 monoallelic expression is regulated in two distinct ways by a shared cis acting regulatory region upstream of H19.

Authors:  M Srivastava; S Hsieh; A Grinberg; L Williams-Simons; S P Huang; K Pfeifer
Journal:  Genes Dev       Date:  2000-05-15       Impact factor: 11.361

3.  LINE-1 elements and X chromosome inactivation: a function for "junk" DNA?

Authors:  M F Lyon
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

4.  A reexamination of spreading of position-effect variegation in the white-roughest region of Drosophila melanogaster.

Authors:  P B Talbert; S Henikoff
Journal:  Genetics       Date:  2000-01       Impact factor: 4.562

5.  Expansions of transgene repeats cause heterochromatin formation and gene silencing in Drosophila.

Authors:  D R Dorer; S Henikoff
Journal:  Cell       Date:  1994-07-01       Impact factor: 41.582

6.  A fission yeast repression element cooperates with centromere-like sequences and defines a mat silent domain boundary.

Authors:  N Ayoub; I Goldshmidt; R Lyakhovetsky; A Cohen
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

7.  Yeast heterochromatin is a dynamic structure that requires silencers continuously.

Authors:  T H Cheng; M R Gartenberg
Journal:  Genes Dev       Date:  2000-02-15       Impact factor: 11.361

8.  Regulation of mating-type information in yeast. Negative control requiring sequences both 5' and 3' to the regulated region.

Authors:  J Abraham; K A Nasmyth; J N Strathern; A J Klar; J B Hicks
Journal:  J Mol Biol       Date:  1984-07-05       Impact factor: 5.469

9.  Identification of sites required for repression of a silent mating type locus in yeast.

Authors:  J B Feldman; J B Hicks; J R Broach
Journal:  J Mol Biol       Date:  1984-10-05       Impact factor: 5.469

10.  A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance.

Authors:  J D Boeke; F LaCroute; G R Fink
Journal:  Mol Gen Genet       Date:  1984
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  18 in total

Review 1.  The central roles of telomeres and subtelomeres in antigenic variation in African trypanosomes.

Authors:  David Horn; J David Barry
Journal:  Chromosome Res       Date:  2005       Impact factor: 5.239

2.  Long-range communication between the silencers of HMR.

Authors:  Lourdes Valenzuela; Namrita Dhillon; Rudra N Dubey; Marc R Gartenberg; Rohinton T Kamakaka
Journal:  Mol Cell Biol       Date:  2008-01-14       Impact factor: 4.272

3.  Subtelomeric elements influence but do not determine silencing levels at Saccharomyces cerevisiae telomeres.

Authors:  Michelle A Mondoux; Virginia A Zakian
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

4.  Subtelomeric ACS-containing proto-silencers act as antisilencers in replication factors mutants in Saccharomyces cerevisiae.

Authors:  Muhammad Attiq Rehman; Dongliang Wang; Genevieve Fourel; Eric Gilson; Krassimir Yankulov
Journal:  Mol Biol Cell       Date:  2008-11-12       Impact factor: 4.138

5.  tRNA Genes Affect Chromosome Structure and Function via Local Effects.

Authors:  Omar Hamdani; Namrita Dhillon; Tsung-Han S Hsieh; Takahiro Fujita; Josefina Ocampo; Jacob G Kirkland; Josh Lawrimore; Tetsuya J Kobayashi; Brandon Friedman; Derek Fulton; Kenneth Y Wu; Răzvan V Chereji; Masaya Oki; Kerry Bloom; David J Clark; Oliver J Rando; Rohinton T Kamakaka
Journal:  Mol Cell Biol       Date:  2019-04-02       Impact factor: 4.272

Review 6.  Transcriptional silencing in Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Authors:  Ying Huang
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

7.  Position effect on the directionality of silencer function in Saccharomyces cerevisiae.

Authors:  Yanfei Zou; Qun Yu; Ya-Hui Chiu; Xin Bi
Journal:  Genetics       Date:  2006-06-18       Impact factor: 4.562

8.  A protosilencer of subtelomeric gene expression in Candida glabrata with unique properties.

Authors:  Alejandro Juárez-Reyes; Candy Y Ramírez-Zavaleta; Luis Medina-Sánchez; Alejandro De Las Peñas; Irene Castaño
Journal:  Genetics       Date:  2011-11-02       Impact factor: 4.562

9.  Differential requirement of DNA replication factors for subtelomeric ARS consensus sequence protosilencers in Saccharomyces cerevisiae.

Authors:  Muhammad Attiq Rehman; Genevieve Fourel; Amit Mathews; Danielle Ramdin; Maria Espinosa; Eric Gilson; Krassimir Yankulov
Journal:  Genetics       Date:  2006-09-15       Impact factor: 4.562

10.  The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences.

Authors:  Marcus E Marvin; Marion M Becker; Pawan Noel; Sue Hardy; Alison A Bertuch; Edward J Louis
Journal:  Genetics       Date:  2009-08-03       Impact factor: 4.562

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