Literature DB >> 11258704

An activation-independent role of transcription factors in insulator function.

G Fourel1, C Boscheron, E Revardel, E Lebrun, Y F Hu, K C Simmen, K Müller, R Li, N Mermod, E Gilson.   

Abstract

Chromatin insulators are defined as transcriptionally neutral elements that prevent negative or positive influence from extending across chromatin to a promoter. Here we show that yeast subtelomeric anti-silencing regions behave as boundaries to telomere-driven silencing and also allow discontinuous propagation of silent chromatin. These two facets of insulator activity, boundary and silencing discontinuity, can be recapitulated by tethering various transcription activation domains to tandem sites on DNA. Importantly, we show that these insulator activities do not involve direct transcriptional activation of the reporter promoter. These findings predict that certain promoters behave as insulators and partition genomes in functionally independent domains.

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Year:  2001        PMID: 11258704      PMCID: PMC1083820          DOI: 10.1093/embo-reports/kve024

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  20 in total

1.  Structural and functional conservation at the boundaries of the chicken beta-globin domain.

Authors:  N Saitoh; A C Bell; F Recillas-Targa; A G West; M Simpson; M Pikaart; G Felsenfeld
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

2.  Chromatin remodeling and activation of chromosomal DNA replication by an acidic transcriptional activation domain from BRCA1.

Authors:  Y F Hu; Z L Hao; R Li
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

3.  Loss of transcriptional activity of a transgene is accompanied by DNA methylation and histone deacetylation and is prevented by insulators.

Authors:  M J Pikaart; F Recillas-Targa; G Felsenfeld
Journal:  Genes Dev       Date:  1998-09-15       Impact factor: 11.361

Review 4.  The chromosome ends of Saccharomyces cerevisiae.

Authors:  E J Louis
Journal:  Yeast       Date:  1995-12       Impact factor: 3.239

5.  The boundaries of the silenced HMR domain in Saccharomyces cerevisiae.

Authors:  D Donze; C R Adams; J Rine; R T Kamakaka
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

6.  SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast.

Authors:  S Strahl-Bolsinger; A Hecht; K Luo; M Grunstein
Journal:  Genes Dev       Date:  1997-01-01       Impact factor: 11.361

Review 7.  Mechanisms of silencing in Saccharomyces cerevisiae.

Authors:  A J Lustig
Journal:  Curr Opin Genet Dev       Date:  1998-04       Impact factor: 5.578

8.  Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage.

Authors:  H Renauld; O M Aparicio; P D Zierath; B L Billington; S K Chhablani; D E Gottschling
Journal:  Genes Dev       Date:  1993-07       Impact factor: 11.361

9.  A proline-rich TGF-beta-responsive transcriptional activator interacts with histone H3.

Authors:  A Alevizopoulos; Y Dusserre; M Tsai-Pflugfelder; T von der Weid; W Wahli; N Mermod
Journal:  Genes Dev       Date:  1995-12-15       Impact factor: 11.361

10.  Functional differences between mammalian transcription activation domains at the yeast GAL1 promoter.

Authors:  M Künzler; G H Braus; O Georgiev; K Seipel; W Schaffner
Journal:  EMBO J       Date:  1994-02-01       Impact factor: 11.598

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  35 in total

1.  Protosilencers in Saccharomyces cerevisiae subtelomeric regions.

Authors:  E Lebrun; E Revardel; C Boscheron; R Li; E Gilson; G Fourel
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

2.  The functional analysis of insulator interactions in the Drosophila embryo.

Authors:  Parimal Majumder; Haini N Cai
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-16       Impact factor: 11.205

3.  Rap1p and other transcriptional regulators can function in defining distinct domains of gene expression.

Authors:  Qun Yu; Runxiang Qiu; Travis B Foland; Dan Griesen; Carl S Galloway; Ya-Hui Chiu; Joseph Sandmeier; James R Broach; Xin Bi
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

4.  The vertebrate protein CTCF functions as an insulator in Saccharomyces cerevisiae.

Authors:  Pierre-Antoine Defossez; Eric Gilson
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

5.  Molecular requirements for gene expression mediated by targeted histone acetyltransferases.

Authors:  Sandra Jacobson; Lorraine Pillus
Journal:  Mol Cell Biol       Date:  2004-07       Impact factor: 4.272

6.  Barrier proteins remodel and modify chromatin to restrict silenced domains.

Authors:  Masaya Oki; Lourdes Valenzuela; Tomoko Chiba; Takashi Ito; Rohinton T Kamakaka
Journal:  Mol Cell Biol       Date:  2004-03       Impact factor: 4.272

7.  The Yaf9 component of the SWR1 and NuA4 complexes is required for proper gene expression, histone H4 acetylation, and Htz1 replacement near telomeres.

Authors:  Haiying Zhang; Daniel O Richardson; Douglas N Roberts; Rhea Utley; Hediye Erdjument-Bromage; Paul Tempst; Jacques Côté; Bradley R Cairns
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

8.  Histone H1 of Saccharomyces cerevisiae inhibits transcriptional silencing.

Authors:  Marie Veron; Yanfei Zou; Qun Yu; Xin Bi; Abdelkader Selmi; Eric Gilson; Pierre-Antoine Defossez
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

9.  Multiple bromodomain genes are involved in restricting the spread of heterochromatic silencing at the Saccharomyces cerevisiae HMR-tRNA boundary.

Authors:  Nithya Jambunathan; Adam W Martinez; Elizabeth C Robert; Nneamaka B Agochukwu; Megan E Ibos; Sandra L Dugas; David Donze
Journal:  Genetics       Date:  2005-08-03       Impact factor: 4.562

10.  Tbf1 and Vid22 promote resection and non-homologous end joining of DNA double-strand break ends.

Authors:  Diego Bonetti; Savani Anbalagan; Giovanna Lucchini; Michela Clerici; Maria Pia Longhese
Journal:  EMBO J       Date:  2012-12-07       Impact factor: 11.598

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