Literature DB >> 11917007

Transcriptional silencing in Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Ying Huang1.   

Abstract

Transcriptional silencing is a heritable form of gene inactivation that involves the assembly of large regions of DNA into a specialized chromatin structure that inhibits transcription. This phenomenon is responsible for inhibiting transcription at silent mating-type loci, telomeres and rDNA repeats in both budding yeast Saccharomyces cerevisiae and fission yeast Schizosaccharomyces pombe, as well as at centromeres in fission yeast. Although transcriptional silencing in both S.cerevisiae and S.pombe involves modification of chromatin, no apparent amino acid sequence similarities have been reported between the proteins involved in establishment and maintenance of silent chromatin in these two distantly related yeasts. Silencing in S.cerevisiae is mediated by Sir2p-containing complexes, whereas silencing in S.pombe is mediated primarily by Swi6-containing complexes. The Swi6 complexes of S.pombe contain proteins closely related to their counterparts in higher eukaryotes, but have no apparent orthologs in S.cerevisiae. Silencing proteins from both yeasts are also actively involved in other chromosome-related nuclear functions, including DNA repair and the regulation of chromatin structure.

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Year:  2002        PMID: 11917007      PMCID: PMC101825          DOI: 10.1093/nar/30.7.1465

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  269 in total

Review 1.  Histone acetylation and an epigenetic code.

Authors:  B M Turner
Journal:  Bioessays       Date:  2000-09       Impact factor: 4.345

Review 2.  Transcriptional silencing in fission yeast.

Authors:  S I Grewal
Journal:  J Cell Physiol       Date:  2000-09       Impact factor: 6.384

Review 3.  The pachytene checkpoint.

Authors:  G S Roeder; J M Bailis
Journal:  Trends Genet       Date:  2000-09       Impact factor: 11.639

4.  PSI-BLAST searches using hidden markov models of structural repeats: prediction of an unusual sliding DNA clamp and of beta-propellers in UV-damaged DNA-binding protein.

Authors:  A F Neuwald; A Poleksic
Journal:  Nucleic Acids Res       Date:  2000-09-15       Impact factor: 16.971

5.  Role for the silencing protein Dot1 in meiotic checkpoint control.

Authors:  P A San-Segundo; G S Roeder
Journal:  Mol Biol Cell       Date:  2000-10       Impact factor: 4.138

Review 6.  Gene silencing: two faces of SIR2.

Authors:  D E Gottschling
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

7.  Checkpoint proteins influence telomeric silencing and length maintenance in budding yeast.

Authors:  M P Longhese; V Paciotti; H Neecke; G Lucchini
Journal:  Genetics       Date:  2000-08       Impact factor: 4.562

8.  Requirement of NAD and SIR2 for life-span extension by calorie restriction in Saccharomyces cerevisiae.

Authors:  S J Lin; P A Defossez; L Guarente
Journal:  Science       Date:  2000-09-22       Impact factor: 47.728

9.  Lineage-specific loss and divergence of functionally linked genes in eukaryotes.

Authors:  L Aravind; H Watanabe; D J Lipman; E V Koonin
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

10.  Regulation of chromatin structure by site-specific histone H3 methyltransferases.

Authors:  S Rea; F Eisenhaber; D O'Carroll; B D Strahl; Z W Sun; M Schmid; S Opravil; K Mechtler; C P Ponting; C D Allis; T Jenuwein
Journal:  Nature       Date:  2000-08-10       Impact factor: 49.962

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  38 in total

1.  Protein:protein interactions and the pairing of boundary elements in vivo.

Authors:  Jason Blanton; Miklos Gaszner; Paul Schedl
Journal:  Genes Dev       Date:  2003-03-01       Impact factor: 11.361

Review 2.  Repetitive elements in genomes of parasitic protozoa.

Authors:  Bill Wickstead; Klaus Ersfeld; Keith Gull
Journal:  Microbiol Mol Biol Rev       Date:  2003-09       Impact factor: 11.056

3.  Identification of novel histone post-translational modifications by peptide mass fingerprinting.

Authors:  Liwen Zhang; Ericka E Eugeni; Mark R Parthun; Michael A Freitas
Journal:  Chromosoma       Date:  2003-07-09       Impact factor: 4.316

Review 4.  Transcriptional regulation at the yeast nuclear envelope.

Authors:  Babett Steglich; Shelley Sazer; Karl Ekwall
Journal:  Nucleus       Date:  2013-09-06       Impact factor: 4.197

Review 5.  Replication of heterochromatin: insights into mechanisms of epigenetic inheritance.

Authors:  Julie A Wallace; Terry L Orr-Weaver
Journal:  Chromosoma       Date:  2005-11-15       Impact factor: 4.316

6.  Schizosaccharomyces pombe mst2+ encodes a MYST family histone acetyltransferase that negatively regulates telomere silencing.

Authors:  Eliana B Gómez; Joaquín M Espinosa; Susan L Forsburg
Journal:  Mol Cell Biol       Date:  2005-10       Impact factor: 4.272

7.  ROR1/RPA2A, a putative replication protein A2, functions in epigenetic gene silencing and in regulation of meristem development in Arabidopsis.

Authors:  Ran Xia; Junguo Wang; Chunyan Liu; Yu Wang; Youqun Wang; Jixian Zhai; Jun Liu; Xuhui Hong; Xiaofeng Cao; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant Cell       Date:  2005-12-02       Impact factor: 11.277

Review 8.  The contradictory definitions of heterochromatin: transcription and silencing.

Authors:  Kathryn L Huisinga; Brent Brower-Toland; Sarah C R Elgin
Journal:  Chromosoma       Date:  2006-02-28       Impact factor: 4.316

9.  New alleles of SIR2 define cell-cycle-specific silencing functions.

Authors:  Mirela Matecic; Kristen Martins-Taylor; Merrit Hickman; Jason Tanny; Danesh Moazed; Scott G Holmes
Journal:  Genetics       Date:  2006-06-18       Impact factor: 4.562

10.  Smc5/6 maintains stalled replication forks in a recombination-competent conformation.

Authors:  Anja Irmisch; Eleni Ampatzidou; Ken'ichi Mizuno; Matthew J O'Connell; Johanne M Murray
Journal:  EMBO J       Date:  2009-01-21       Impact factor: 11.598

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