Literature DB >> 15693622

Molecular adaptation in the ice worm, Mesenchytraeus solifugus: divergence of energetic-associated genes.

Angela H Farrell1, Kristi A Hohenstein, Daniel H Shain.   

Abstract

The ice worm, Mesenchytraeus solifugus, is the largest glacially obligate metazoan and among only a few metazoan species that complete their life cycle at 0 degrees C. We conducted a large-scale sequencing analysis of cDNAs isolated from ice worm anterior segments. Sequence comparisons among an available group of ice worm, arthropod, chordate, and nematode homologues suggest that ice worms encode proteins that are less bulky, are less polar, and contain fewer charged residues. Also, subunits of the catalytic F1 ATP synthase complex appear to have diverged more rapidly than other ice worm genes examined, suggesting a role in cold-temperature adaptation. Modeling of F1 ATP synthase beta and gamma subunits identified nonconservative, ice worm-specific amino acid substitutions at subunit contact sites and at sites proximal to the catalytic site.

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Year:  2004        PMID: 15693622     DOI: 10.1007/s00239-004-2658-z

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  34 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Cold adapted enzymes.

Authors:  A O Smalås; H K Leiros; V Os; N P Willassen
Journal:  Biotechnol Annu Rev       Date:  2000

3.  Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.

Authors:  P J Haney; J H Badger; G L Buldak; C I Reich; C R Woese; G J Olsen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

4.  Structure of bovine mitochondrial F(1)-ATPase with nucleotide bound to all three catalytic sites: implications for the mechanism of rotary catalysis.

Authors:  R I Menz; J E Walker; A G Leslie
Journal:  Cell       Date:  2001-08-10       Impact factor: 41.582

5.  Vagaries of the molecular clock.

Authors:  F J Ayala
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

6.  Origin of the metazoan phyla: molecular clocks confirm paleontological estimates.

Authors:  F J Ayala; A Rzhetsky; F J Ayala
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-20       Impact factor: 11.205

Review 7.  Cold-adapted enzymes.

Authors:  C J Marshall
Journal:  Trends Biotechnol       Date:  1997-09       Impact factor: 19.536

Review 8.  Molecular phylogeny of the animal kingdom.

Authors:  K G Field; G J Olsen; D J Lane; S J Giovannoni; M T Ghiselin; E C Raff; N R Pace; R A Raff
Journal:  Science       Date:  1988-02-12       Impact factor: 47.728

9.  Triose-phosphate isomerase (TIM) of the psychrophilic bacterium Vibrio marinus. Kinetic and structural properties.

Authors:  M Alvarez; J P Zeelen; V Mainfroid; F Rentier-Delrue; J A Martial; L Wyns; R K Wierenga; D Maes
Journal:  J Biol Chem       Date:  1998-01-23       Impact factor: 5.157

10.  Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.

Authors:  Yousuke Nishio; Yoji Nakamura; Yutaka Kawarabayasi; Yoshihiro Usuda; Eiichiro Kimura; Shinichi Sugimoto; Kazuhiko Matsui; Akihiko Yamagishi; Hisashi Kikuchi; Kazuho Ikeo; Takashi Gojobori
Journal:  Genome Res       Date:  2003-07       Impact factor: 9.043

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  3 in total

1.  Divergence of AMP Deaminase in the Ice Worm Mesenchytraeus solifugus (Annelida, Clitellata, Enchytraeidae).

Authors:  Roberto Marotta; Bradley R Parry; Daniel H Shain
Journal:  Int J Evol Biol       Date:  2009-07-05

2.  Bacterial Microbiota Associated with the Glacier Ice Worm Is Dominated by Both Worm-Specific and Glacier-Derived Facultative Lineages.

Authors:  Takumi Murakami; Takahiro Segawa; Roman Dial; Nozomu Takeuchi; Shiro Kohshima; Yuichi Hongoh
Journal:  Microbes Environ       Date:  2017-03-09       Impact factor: 2.912

3.  A Low Temperature Limit for Life on Earth.

Authors:  Andrew Clarke; G John Morris; Fernanda Fonseca; Benjamin J Murray; Elizabeth Acton; Hannah C Price
Journal:  PLoS One       Date:  2013-06-19       Impact factor: 3.240

  3 in total

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