Literature DB >> 11157933

umuDC-mediated cold sensitivity is a manifestation of functions of the UmuD(2)C complex involved in a DNA damage checkpoint control.

M D Sutton1, G C Walker.   

Abstract

The umuDC genes are part of the Escherichia coli SOS response, and their expression is induced as a consequence of DNA damage. After induction, they help to promote cell survival via two temporally separate pathways. First, UmuD and UmuC together participate in a cell cycle checkpoint control; second, UmuD'(2)C enables translesion DNA replication over any remaining unrepaired or irreparable lesions in the DNA. Furthermore, elevated expression of the umuDC gene products leads to a cold-sensitive growth phenotype that correlates with a rapid inhibition of DNA synthesis. Here, using two mutant umuC alleles, one that encodes a UmuC derivative that lacks a detectable DNA polymerase activity (umuC104; D101N) and another that encodes a derivative that is unable to confer cold sensitivity but is proficient for SOS mutagenesis (umuC125; A39V), we show that umuDC-mediated cold sensitivity can be genetically separated from the role of UmuD'(2)C in SOS mutagenesis. Our genetic and biochemical characterizations of UmuC derivatives bearing nested deletions of C-terminal sequences indicate that umuDC-mediated cold sensitivity is not due solely to the single-stranded DNA binding activity of UmuC. Taken together, our analyses suggest that umuDC-mediated cold sensitivity is conferred by an activity of the UmuD(2)C complex and not by the separate actions of the UmuD and UmuC proteins. Finally, we present evidence for structural differences between UmuD and UmuD' in solution, consistent with the notion that these differences are important for the temporal regulation of the two separate physiological roles of the umuDC gene products.

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Year:  2001        PMID: 11157933      PMCID: PMC94994          DOI: 10.1128/JB.183.4.1215-1224.2001

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  50 in total

1.  Bridging the gap: a family of novel DNA polymerases that replicate faulty DNA.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

2.  The mutagenesis proteins UmuD' and UmuC prevent lethal frameshifts while increasing base substitution mutations.

Authors:  N B Reuven; G Tomer; Z Livneh
Journal:  Mol Cell       Date:  1998-08       Impact factor: 17.970

3.  Mutations affecting the ability of the Escherichia coli UmuD' protein to participate in SOS mutagenesis.

Authors:  T Ohta; M D Sutton; A Guzzo; S Cole; A E Ferentz; G C Walker
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

4.  Dimerization of the UmuD' protein in solution and its implications for regulation of SOS mutagenesis.

Authors:  A E Ferentz; T Opperman; G C Walker; G Wagner
Journal:  Nat Struct Biol       Date:  1997-12

5.  RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange.

Authors:  E M Seitz; J P Brockman; S J Sandler; A J Clark; S C Kowalczykowski
Journal:  Genes Dev       Date:  1998-05-01       Impact factor: 11.361

Review 6.  Damage inducible mutagenesis: recent insights into the activities of the Umu family of mutagenesis proteins.

Authors:  R Woodgate; A S Levine
Journal:  Cancer Surv       Date:  1996

Review 7.  Mammalian Rad51 protein: a RecA homologue with pleiotropic functions.

Authors:  S Vispé; M Defais
Journal:  Biochimie       Date:  1997-10       Impact factor: 4.079

8.  A role for the umuDC gene products of Escherichia coli in increasing resistance to DNA damage in stationary phase by inhibiting the transition to exponential growth.

Authors:  S Murli; T Opperman; B T Smith; G C Walker
Journal:  J Bacteriol       Date:  2000-02       Impact factor: 3.490

9.  The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication.

Authors:  N B Reuven; G Arad; A Maor-Shoshani; Z Livneh
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

10.  The UmuD' protein filament and its potential role in damage induced mutagenesis.

Authors:  T S Peat; E G Frank; J P McDonald; A S Levine; R Woodgate; W A Hendrickson
Journal:  Structure       Date:  1996-12-15       Impact factor: 5.006

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  24 in total

Review 1.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

2.  Posttranslational modification of the umuD-encoded subunit of Escherichia coli DNA polymerase V regulates its interactions with the beta processivity clamp.

Authors:  Mark D Sutton; Issay Narumi; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

3.  Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).

Authors:  A E Ferentz; G C Walker; G Wagner
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

4.  UmuD and RecA directly modulate the mutagenic potential of the Y family DNA polymerase DinB.

Authors:  Veronica G Godoy; Daniel F Jarosz; Sharotka M Simon; Alexej Abyzov; Valentin Ilyin; Graham C Walker
Journal:  Mol Cell       Date:  2007-12-28       Impact factor: 17.970

Review 5.  DNA damage responses in prokaryotes: regulating gene expression, modulating growth patterns, and manipulating replication forks.

Authors:  Kenneth N Kreuzer
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

6.  A ΔdinB mutation that sensitizes Escherichia coli to the lethal effects of UV- and X-radiation.

Authors:  Mei-Chong W Lee; Magdalena Franco; Doris M Vargas; Deborah A Hudman; Steven J White; Robert G Fowler; Neil J Sargentini
Journal:  Mutat Res       Date:  2014-03-20       Impact factor: 2.433

7.  Conformational dynamics of the Escherichia coli DNA polymerase manager proteins UmuD and UmuD'.

Authors:  Jing Fang; Kasper D Rand; Michelle C Silva; Thomas E Wales; John R Engen; Penny J Beuning
Journal:  J Mol Biol       Date:  2010-03-04       Impact factor: 5.469

Review 8.  Insights into the complex levels of regulation imposed on Escherichia coli DNA polymerase V.

Authors:  Myron F Goodman; John P McDonald; Malgorzata M Jaszczur; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2016-05-13

9.  The Roles of UmuD in Regulating Mutagenesis.

Authors:  Jaylene N Ollivierre; Jing Fang; Penny J Beuning
Journal:  J Nucleic Acids       Date:  2010-09-30

10.  Y-family DNA polymerases respond to DNA damage-independent inhibition of replication fork progression.

Authors:  Veronica G Godoy; Daniel F Jarosz; Fabianne L Walker; Lyle A Simmons; Graham C Walker
Journal:  EMBO J       Date:  2006-02-16       Impact factor: 11.598

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