Literature DB >> 24097899

DNA damage responses in prokaryotes: regulating gene expression, modulating growth patterns, and manipulating replication forks.

Kenneth N Kreuzer1.   

Abstract

Recent advances in the area of bacterial DNA damage responses are reviewed here. The SOS pathway is still the major paradigm of bacterial DNA damage response, and recent studies have clarified the mechanisms of SOS induction and key physiological roles of SOS including a very major role in genetic exchange and variation. When considering diverse bacteria, it is clear that SOS is not a uniform pathway with one purpose, but rather a platform that has evolved for differing functions in different bacteria. Relating in part to the SOS response, the field has uncovered multiple apparent cell-cycle checkpoints that assist cell survival after DNA damage and remarkable pathways that induce programmed cell death in bacteria. Bacterial DNA damage responses are also much broader than SOS, and several important examples of LexA-independent regulation will be reviewed. Finally, some recent advances that relate to the replication and repair of damaged DNA will be summarized.

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Year:  2013        PMID: 24097899      PMCID: PMC3809575          DOI: 10.1101/cshperspect.a012674

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  182 in total

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Journal:  EMBO Rep       Date:  2009-06-26       Impact factor: 8.807

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Authors:  Luciana Amado; Andrei Kuzminov
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Review 4.  Oxidative stress resistance in Deinococcus radiodurans.

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Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

5.  Rad52 forms DNA repair and recombination centers during S phase.

Authors:  M Lisby; R Rothstein; U H Mortensen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

6.  The AidB component of the Escherichia coli adaptive response to alkylating agents is a flavin-containing, DNA-binding protein.

Authors:  Mukta S Rohankhedkar; Scott B Mulrooney; William J Wedemeyer; Robert P Hausinger
Journal:  J Bacteriol       Date:  2006-01       Impact factor: 3.490

7.  Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response.

Authors:  Jennifer M Auchtung; Catherine A Lee; Rita E Monson; Alisa P Lehman; Alan D Grossman
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-16       Impact factor: 11.205

Review 8.  Aeons of distress: an evolutionary perspective on the bacterial SOS response.

Authors:  Ivan Erill; Susana Campoy; Jordi Barbé
Journal:  FEMS Microbiol Rev       Date:  2007-09-18       Impact factor: 16.408

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Journal:  J Bacteriol       Date:  2007-05-18       Impact factor: 3.490

Review 10.  Recombinational repair and restart of damaged replication forks.

Authors:  Peter McGlynn; Robert G Lloyd
Journal:  Nat Rev Mol Cell Biol       Date:  2002-11       Impact factor: 94.444

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  80 in total

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Authors:  Lisa R Racki; Elitza I Tocheva; Michael G Dieterle; Meaghan C Sullivan; Grant J Jensen; Dianne K Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

Review 2.  A Toxic Environment: a Growing Understanding of How Microbial Communities Affect Escherichia coli O157:H7 Shiga Toxin Expression.

Authors:  Erin M Nawrocki; Hillary M Mosso; Edward G Dudley
Journal:  Appl Environ Microbiol       Date:  2020-11-24       Impact factor: 4.792

Review 3.  Translesion DNA synthesis and mutagenesis in prokaryotes.

Authors:  Robert P Fuchs; Shingo Fujii
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

4.  Biological cost of pyocin production during the SOS response in Pseudomonas aeruginosa.

Authors:  Jon Penterman; Pradeep K Singh; Graham C Walker
Journal:  J Bacteriol       Date:  2014-07-14       Impact factor: 3.490

5.  Roles of Bacillus subtilis RecA, Nucleotide Excision Repair, and Translesion Synthesis Polymerases in Counteracting Cr(VI)-Promoted DNA Damage.

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Journal:  J Bacteriol       Date:  2017-11-14       Impact factor: 3.490

7.  YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli.

Authors:  Matthew A Jorgenson; Kevin D Young
Journal:  J Bacteriol       Date:  2018-06-11       Impact factor: 3.490

8.  The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR protein eliciting DNA damage to bacterial competitors.

Authors:  Panayiota Pissaridou; Luke P Allsopp; Sarah Wettstadt; Sophie A Howard; Despoina A I Mavridou; Alain Filloux
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-19       Impact factor: 11.205

Review 9.  Regulation of Cell Division in Bacteria by Monitoring Genome Integrity and DNA Replication Status.

Authors:  Peter E Burby; Lyle A Simmons
Journal:  J Bacteriol       Date:  2020-01-02       Impact factor: 3.490

10.  Genome Location Dictates the Transcriptional Response to PolC Inhibition in Clostridium difficile.

Authors:  Erika van Eijk; Ilse M Boekhoud; Ed J Kuijper; Ingrid M J G Bos-Sanders; George Wright; Wiep Klaas Smits
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