Literature DB >> 11125073

GenMapDB: a database of mapped human BAC clones.

M Morley1, M Arcaro, J Burdick, R Yonescu, T Reid, I R Kirsch, V G Cheung.   

Abstract

GenMapDB (http://genomics.med.upenn.edu/genmapdb) is a repository of human bacterial artificial chromosome (BAC) clones mapped by our laboratory to sequence-tagged site markers. Currently, GenMapDB contains over 3000 mapped clones that span 19 chromosomes, chromosomes 2, 4, 5, 9-22, X and Y. This database provides positional information about human BAC clones from the RPCI-11 human male BAC library. It also contains restriction fragment analysis data and end sequences of the clones. GenMapDB is freely available to the public. The main purpose of GenMapDB is to organize the mapping data and to allow the research community to search for mapped BAC clones that can be used in gene mapping studies and chromosomal mutation analysis projects.

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Year:  2001        PMID： 11125073      PMCID： PMC29809          DOI： 10.1093/nar/29.1.144

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  11 in total

1.  A resource of mapped human bacterial artificial chromosome clones.

Authors:  V G Cheung; H L Dalrymple; S Narasimhan; J Watts; G Schuler; A K Raap; M Morley; A Bruzel
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

2.  RHdb: the radiation hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  A systematic, high-resolution linkage of the cytogenetic and physical maps of the human genome.

Authors:  I R Kirsch; E D Green; R Yonescu; R Strausberg; N Carter; D Bentley; M A Leversha; I Dunham; V V Braden; E Hilgenfeld; G Schuler; A E Lash; G L Shen; M Martelli; W M Kuehl; R D Klausner; T Ried
Journal:  Nat Genet       Date:  2000-04       Impact factor: 38.330

4.  Human BAC ends.

Authors:  S Zhao
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

5.  A radiation hybrid map of the human genome.

Authors:  G Gyapay; K Schmitt; C Fizames; H Jones; N Vega-Czarny; D Spillett; D Muselet; J F Prud'homme; C Dib; C Auffray; J Morissette; J Weissenbach; P N Goodfellow
Journal:  Hum Mol Genet       Date:  1996-03       Impact factor: 6.150

6.  An improved approach for construction of bacterial artificial chromosome libraries.

Authors:  K Osoegawa; P Y Woon; B Zhao; E Frengen; M Tateno; J J Catanese; P J de Jong
Journal:  Genomics       Date:  1998-08-15       Impact factor: 5.736

7.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

8.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

9.  Image analysis of restriction enzyme fingerprint autoradiograms.

Authors:  J Sulston; F Mallett; R Durbin; T Horsnell
Journal:  Comput Appl Biosci       Date:  1989-04

10.  A physical map of 30,000 human genes.

Authors:  P Deloukas; G D Schuler; G Gyapay; E M Beasley; C Soderlund; P Rodriguez-Tomé; L Hui; T C Matise; K B McKusick; J S Beckmann; S Bentolila; M Bihoreau; B B Birren; J Browne; A Butler; A B Castle; N Chiannilkulchai; C Clee; P J Day; A Dehejia; T Dibling; N Drouot; S Duprat; C Fizames; S Fox; S Gelling; L Green; P Harrison; R Hocking; E Holloway; S Hunt; S Keil; P Lijnzaad; C Louis-Dit-Sully; J Ma; A Mendis; J Miller; J Morissette; D Muselet; H C Nusbaum; A Peck; S Rozen; D Simon; D K Slonim; R Staples; L D Stein; E A Stewart; M A Suchard; T Thangarajah; N Vega-Czarny; C Webber; X Wu; J Hudson; C Auffray; N Nomura; J M Sikela; M H Polymeropoulos; M R James; E S Lander; T J Hudson; R M Myers; D R Cox; J Weissenbach; M S Boguski; D R Bentley
Journal:  Science       Date:  1998-10-23       Impact factor: 47.728
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  3 in total

1.  DNA modification and functional delivery into human cells using Escherichia coli DH10B.

Authors:  Kumaran Narayanan; Peter E Warburton
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

2.  TRUNCATULIX--a data warehouse for the legume community.

Authors:  Kolja Henckel; Kai J Runte; Thomas Bekel; Michael Dondrup; Tobias Jakobi; Helge Küster; Alexander Goesmann
Journal:  BMC Plant Biol       Date:  2009-02-11       Impact factor: 4.215

3.  Integration of cytogenetic landmarks into the draft sequence of the human genome.

Authors:  V G Cheung; N Nowak; W Jang; I R Kirsch; S Zhao; X N Chen; T S Furey; U J Kim; W L Kuo; M Olivier; J Conroy; A Kasprzyk; H Massa; R Yonescu; S Sait; C Thoreen; A Snijders; E Lemyre; J A Bailey; A Bruzel; W D Burrill; S M Clegg; S Collins; P Dhami; C Friedman; C S Han; S Herrick; J Lee; A H Ligon; S Lowry; M Morley; S Narasimhan; K Osoegawa; Z Peng; I Plajzer-Frick; B J Quade; D Scott; K Sirotkin; A A Thorpe; J W Gray; J Hudson; D Pinkel; T Ried; L Rowen; G L Shen-Ong; R L Strausberg; E Birney; D F Callen; J F Cheng; D R Cox; N A Doggett; N P Carter; E E Eichler; D Haussler; J R Korenberg; C C Morton; D Albertson; G Schuler; P J de Jong; B J Trask
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962
  3 in total

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