Literature DB >> 8852657

A radiation hybrid map of the human genome.

G Gyapay1, K Schmitt, C Fizames, H Jones, N Vega-Czarny, D Spillett, D Muselet, J F Prud'homme, C Dib, C Auffray, J Morissette, J Weissenbach, P N Goodfellow.   

Abstract

We have developed a panel of whole-genome radiation hybrids by fusing irradiated diploid human fibroblasts with recipient hamster cells. This panel of 168 cell lines has been typed with microsatellite markers of known genetic location. Of 711 AFM genetic markers 404 were selected to construct a robust framework map that spans all the autosomes and the X chromosome. To demonstrate the utility of the panel, 374 expressed sequence tags (ESTs) previously assigned to chromosomes 1, 2, 14 and 16 were localized on this map. All of these ESTs could be positioned by pairwise linkage to one of the framework markers with a LOD score of greater than 8. The whole genome radiation hybrid panel described here has been used as the starting material for the Genebridge4 panel that is being made widely available for genome mapping projects.

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Year:  1996        PMID: 8852657     DOI: 10.1093/hmg/5.3.339

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  86 in total

1.  Radiation hybrid mapping of the zebrafish genome.

Authors:  N A Hukriede; L Joly; M Tsang; J Miles; P Tellis; J A Epstein; W B Barbazuk; F N Li; B Paw; J H Postlethwait; T J Hudson; L I Zon; J D McPherson; M Chevrette; I B Dawid; S L Johnson; M Ekker
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  A resource of mapped human bacterial artificial chromosome clones.

Authors:  V G Cheung; H L Dalrymple; S Narasimhan; J Watts; G Schuler; A K Raap; M Morley; A Bruzel
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

3.  A comprehensive view of human chromosome 1.

Authors:  P S White; E P Sulman; C J Porter; T C Matise
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

4.  A 7.5 Mb sequence-ready PAC contig and gene expression map of human chromosome 11p13-p14.1.

Authors:  B Gawin; A Niederführ; N Schumacher; H Hummerich; P F Little; M Gessler
Journal:  Genome Res       Date:  1999-11       Impact factor: 9.043

5.  RHdb: the radiation hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

6.  RHdb: the Radiation Hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

7.  GenMapDB: a database of mapped human BAC clones.

Authors:  M Morley; M Arcaro; J Burdick; R Yonescu; T Reid; I R Kirsch; V G Cheung
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

8.  Hypothesis: for the worst and for the best, L1Hs retrotransposons actively participate in the evolution of the human centromeric alphoid sequences.

Authors:  A M Laurent; J Puechberty; G Roizès
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

9.  A fast and scalable radiation hybrid map construction and integration strategy.

Authors:  R Agarwala; D L Applegate; D Maglott; G D Schuler; A A Schäffer
Journal:  Genome Res       Date:  2000-03       Impact factor: 9.043

10.  Selective mapping: a strategy for optimizing the construction of high-density linkage maps.

Authors:  T J Vision; D G Brown; D B Shmoys; R T Durrett; S D Tanksley
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

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