Literature DB >> 11061226

Differential multiple-quantum relaxation arising from cross-correlated time-modulation of isotropic chemical shifts.

K Kloiber1, R Konrat.   

Abstract

In this paper it is demonstrated that cross-correlated time modulation of isotropic chemical shifts ('conformational exchange') leads to differential relaxation of double- and zero-quantum coherences, respectively. Quantitative information can be obtained from the time dependence of the interconversion between the two two-spin coherences 2IxSx and 2IySy, induced by the differential relaxation. The effect is illustrated with an application to 13C,15N-labeled quail CRP2(LIM2), by studying 15N-1H(N) multiple-quantum relaxation. Significant cross-correlated fluctuations of isotropic chemical shifts were observed for residues which are part of a disordered loop region connecting two beta-strands in CRP2(LIM2). Differential 1H(N) and 15N exchange contributions to multiple-quantum relaxation observed at these sites illustrate the complex interplay between hydrogen bonding events and conformational reorientations in proteins.

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Year:  2000        PMID: 11061226     DOI: 10.1023/a:1008317212558

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  18 in total

1.  Direct measurement of angles between bond vectors in high-resolution NMR.

Authors:  B Reif; M Hennig; C Griesinger
Journal:  Science       Date:  1997-05-23       Impact factor: 47.728

2.  Study of protein dynamics in solution by measurement of (13)C (α)- (13)CO NOE and (13)CO longitudinal relaxation.

Authors:  L Zeng; M W Fischer; E R Zuiderweg
Journal:  J Biomol NMR       Date:  1996-03       Impact factor: 2.835

3.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

4.  A novel experiment for the quantitative measurement of CSA(1H(N))/CSA(15N) cross-correlated relaxation in 15N-labeled proteins.

Authors:  M Tessari; G W Vuister
Journal:  J Biomol NMR       Date:  2000-02       Impact factor: 2.835

5.  Pervasive conformational fluctuations on microsecond time scales in a fibronectin type III domain.

Authors:  M Akke; J Liu; J Cavanagh; H P Erickson; A G Palmer
Journal:  Nat Struct Biol       Date:  1998-01

6.  Protein dynamics studied by rotating frame 15N spin relaxation times.

Authors:  T Szyperski; P Luginbühl; G Otting; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

7.  Measurement of cross correlation between dipolar coupling and chemical shift anisotropy in the spin relaxation of 13C, 15N-labeled proteins.

Authors:  R Ghose; K Huang; J H Prestegard
Journal:  J Magn Reson       Date:  1998-12       Impact factor: 2.229

8.  Structure of the carboxy-terminal LIM domain from the cysteine rich protein CRP.

Authors:  G C Pérez-Alvarado; C Miles; J W Michelsen; H A Louis; D R Winge; M C Beckerle; M F Summers
Journal:  Nat Struct Biol       Date:  1994-06

9.  Backbone dynamics of (1-71)bacterioopsin studied by two-dimensional 1H-15N NMR spectroscopy.

Authors:  K V Pervushin; A S Arseniev
Journal:  Eur J Biochem       Date:  1994-02-01

10.  The cysteine-rich protein family of highly related LIM domain proteins.

Authors:  R Weiskirchen; J D Pino; T Macalma; K Bister; M C Beckerle
Journal:  J Biol Chem       Date:  1995-12-01       Impact factor: 5.157

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  24 in total

1.  Intraresidue 1H-15N-13C' and 1H alpha-13C alpha-13C' dipole-CSA relaxation interference as a source of constraints for structural refinement of metal-binding sites in zinc-finger proteins.

Authors:  K Kloiber; W Schüler; R Konrat
Journal:  J Biomol NMR       Date:  2001-04       Impact factor: 2.835

2.  Correlated motions of successive amide N-H bonds in proteins.

Authors:  Philippe Pelupessy; Sapna Ravindranathan; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

3.  Triple quantum decoherence under multiple refocusing: slow correlated chemical shift modulations of C' and N nuclei in proteins.

Authors:  Julien Wist; Dominique Frueh; Joel R Tolman; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2004-03       Impact factor: 2.835

4.  Differential multiple quantum relaxation caused by chemical exchange outside the fast exchange limit.

Authors:  Chunyu Wang; Arthur G Palmer
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

5.  The mechanism of rate-limiting motions in enzyme function.

Authors:  Eric D Watt; Hiroko Shimada; Evgenii L Kovrigin; J Patrick Loria
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-05       Impact factor: 11.205

Review 6.  An overview of recent developments in the interpretation and prediction of fast internal protein dynamics.

Authors:  Gabrielle Nodet; Daniel Abergel
Journal:  Eur Biophys J       Date:  2007-06-12       Impact factor: 1.733

Review 7.  Chemical exchange in biomacromolecules: past, present, and future.

Authors:  Arthur G Palmer
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

8.  Using relaxation dispersion NMR spectroscopy to determine structures of excited, invisible protein states.

Authors:  D Flemming Hansen; Pramodh Vallurupalli; Lewis E Kay
Journal:  J Biomol NMR       Date:  2008-06-24       Impact factor: 2.835

9.  Microsecond timescale backbone conformational dynamics in ubiquitin studied with NMR R1rho relaxation experiments.

Authors:  Francesca Massi; Michael J Grey; Arthur G Palmer
Journal:  Protein Sci       Date:  2005-03       Impact factor: 6.725

10.  Structure and dynamics of the second CARD of human RIG-I provide mechanistic insights into regulation of RIG-I activation.

Authors:  Fabien Ferrage; Kaushik Dutta; Estanislao Nistal-Villán; Jenish R Patel; María T Sánchez-Aparicio; Pablo De Ioannes; Angeliki Buku; Gloria González Aseguinolaza; Adolfo García-Sastre; Aneel K Aggarwal
Journal:  Structure       Date:  2012-10-11       Impact factor: 5.006

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