Literature DB >> 15353599

Ultrafast hydration dynamics in protein unfolding: human serum albumin.

J K Amisha Kamal1, Liang Zhao, Ahmed H Zewail.   

Abstract

We report studies of unfolding and ultrafast hydration dynamics of the protein human serum albumin. Unique in this study is our ability to examine different domains of the same protein and the intermediate on the way to the unfolded state. With femtosecond resolution and site-selective labeling, we isolate the dynamics of domains I and II of the native protein, domain I of the intermediate at 2 M guanidine hydrochloride, and the unfolded state at 6 M of the denaturant. For studies of unfolding, we used the fluorophores, acrylodan (covalently bound to Cys-34 in domain I) and the intrinsic tryptophan (domain II), whereas for hydration dynamics, we probed acrylodan and prodan; the latter is bound to domain II. From the time-dependent spectra and the correlation functions, we obtained the time scale of dynamically ordered water: 57 ps for the more stable domain I and 32 ps for the less stable domain II, in contrast to approximately 0.8 ps for labile, bulk-type water. This trend suggests an increased hydrophilic residues-water interaction of domain I, contrary to some packing models. In the intermediate state, which is characterized by essentially intact domain I and unfolded domain II, the dynamics of ordered water around domain I is nearly the same (61 ps) as that of native state (57 ps), whereas that in the unfolded protein is much shorter (13 ps). We discuss the role of this fluidity in the correlation between stability and function of the protein.

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Year:  2004        PMID: 15353599      PMCID: PMC518771          DOI: 10.1073/pnas.0405724101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

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Authors:  C N Pace
Journal:  Biochemistry       Date:  2001-01-16       Impact factor: 3.162

2.  Femtosecond studies of protein-ligand hydrophobic binding and dynamics: human serum albumin.

Authors:  D Zhong; A Douhal; A H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

3.  Temperature and length scale dependence of hydrophobic effects and their possible implications for protein folding.

Authors:  D M Huang; D Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

4.  Phase-fluorometry study on dielectric relaxation of acrylodan-labeled human serum albumin.

Authors:  A Buzády; J Erostyák; B Somogyi
Journal:  Biophys Chem       Date:  2001-12-11       Impact factor: 2.352

5.  Biological water at the protein surface: dynamical solvation probed directly with femtosecond resolution.

Authors:  Samir Kumar Pal; Jorge Peon; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-12       Impact factor: 11.205

6.  Structural perturbation of proteins in low denaturant concentrations.

Authors:  S Basak; D Debnath; E Haque; S Ray; A Chakrabarti
Journal:  Indian J Biochem Biophys       Date:  2001 Feb-Apr       Impact factor: 1.918

7.  Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.

Authors:  G S Ratnaparkhi; R Varadarajan
Journal:  Biochemistry       Date:  2000-10-10       Impact factor: 3.162

8.  Some factors in the interpretation of protein denaturation.

Authors:  W KAUZMANN
Journal:  Adv Protein Chem       Date:  1959

9.  Interaction of acrylodan with human serum albumin. A fluorescence spectroscopic study.

Authors:  F Moreno; M Cortijo; J González-Jiménez
Journal:  Photochem Photobiol       Date:  1999-11       Impact factor: 3.421

10.  Crystal structure analysis of warfarin binding to human serum albumin: anatomy of drug site I.

Authors:  I Petitpas; A A Bhattacharya; S Twine; M East; S Curry
Journal:  J Biol Chem       Date:  2001-04-02       Impact factor: 5.157

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  19 in total

1.  Fluorescent study of human blood plasma albumin alterations induced by ionizing radiation.

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2.  Molecular origin of time-dependent fluorescence shifts in proteins.

Authors:  Lennart Nilsson; Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-14       Impact factor: 11.205

3.  Unfolding and refolding of bovine serum albumin at acid pH: ultrasound and structural studies.

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Review 4.  Protein-solvent interactions.

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Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

5.  Three-dimensional structure of cofilin bound to monomeric actin derived by structural mass spectrometry data.

Authors:  J K Amisha Kamal; Sabrina A Benchaar; Keiji Takamoto; Emil Reisler; Mark R Chance
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-30       Impact factor: 11.205

6.  Mechanistic investigation of domain specific unfolding of human serum albumin and the effect of sucrose.

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Journal:  Protein Sci       Date:  2013-09-18       Impact factor: 6.725

7.  Femtochemistry of orange II in solution and in chemical and biological nanocavities.

Authors:  Abderrazzak Douhal; Mikel Sanz; Laura Tormo
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-19       Impact factor: 11.205

8.  Biocatalyst activity in nonaqueous environments correlates with centisecond-range protein motions.

Authors:  Ross K Eppler; Elton P Hudson; Shannon D Chase; Jonathan S Dordick; Jeffrey A Reimer; Douglas S Clark
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-07       Impact factor: 11.205

9.  New insight into molecular interaction of heavy metal pollutant--cadmium(II) with human serum albumin.

Authors:  Yan Liu; Mingmao Chen; Longguang Jiang; Ling Song
Journal:  Environ Sci Pollut Res Int       Date:  2014-02-14       Impact factor: 4.223

10.  Study of protein-probe interaction and protective action of surfactant sodium dodecyl sulphate in urea-denatured HSA using charge transfer fluorescence probe methyl ester of N,N-dimethylamino naphthyl acrylic acid.

Authors:  Subrata Mahanta; Rupashree Balia Singh; Nikhil Guchhait
Journal:  J Fluoresc       Date:  2008-09-12       Impact factor: 2.217

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