Literature DB >> 10887153

Error-prone bypass of certain DNA lesions by the human DNA polymerase kappa.

E Ohashi1, T Ogi, R Kusumoto, S Iwai, C Masutani, F Hanaoka, H Ohmori.   

Abstract

The Escherichia coli protein DinB is a newly identified error-prone DNA polymerase. Recently, a human homolog of DinB was identified and named DINB1. We report that the DINB1 gene encodes a DNA polymerase (designated polkappa), which incorporates mismatched bases on a nondamaged template with a high frequency. Moreover, polkappa bypasses an abasic site and N-2-acetylaminofluorene (AAF)-adduct in an error-prone manner but does not bypass a cis-syn or (6-4) thymine-thymine dimer or a cisplatin-adduct. Therefore, our results implicate an important role for polkappa in the mutagenic bypass of certain types of DNA lesions.

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Year:  2000        PMID: 10887153      PMCID: PMC316741     

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  30 in total

Review 1.  Novel DNA polymerases offer clues to the molecular basis of mutagenesis.

Authors:  E C Friedberg; V L Gerlach
Journal:  Cell       Date:  1999-08-20       Impact factor: 41.582

Review 2.  A plethora of lesion-replicating DNA polymerases.

Authors:  R Woodgate
Journal:  Genes Dev       Date:  1999-09-01       Impact factor: 11.361

3.  Bridging the gap: a family of novel DNA polymerases that replicate faulty DNA.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

4.  The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication.

Authors:  N B Reuven; G Arad; A Maor-Shoshani; Z Livneh
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

5.  Characterization of DNA recognition by the human UV-damaged DNA-binding protein.

Authors:  Y Fujiwara; C Masutani; T Mizukoshi; J Kondo; F Hanaoka; S Iwai
Journal:  J Biol Chem       Date:  1999-07-09       Impact factor: 5.157

6.  The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta.

Authors:  C Masutani; R Kusumoto; A Yamada; N Dohmae; M Yokoi; M Yuasa; M Araki; S Iwai; K Takio; F Hanaoka
Journal:  Nature       Date:  1999-06-17       Impact factor: 49.962

7.  UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

Authors:  M Tang; X Shen; E G Frank; M O'Donnell; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

Review 8.  Replication of damaged DNA: molecular defect in xeroderma pigmentosum variant cells.

Authors:  A M Cordonnier; R P Fuchs
Journal:  Mutat Res       Date:  1999-10-22       Impact factor: 2.433

9.  The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis.

Authors:  J Wagner; P Gruz; S R Kim; M Yamada; K Matsui; R P Fuchs; T Nohmi
Journal:  Mol Cell       Date:  1999-08       Impact factor: 17.970

10.  Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily.

Authors:  V L Gerlach; L Aravind; G Gotway; R A Schultz; E V Koonin; E C Friedberg
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

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  96 in total

Review 1.  A new class of errant DNA polymerases provides candidates for somatic hypermutation.

Authors:  B Tippin; M F Goodman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-01-29       Impact factor: 6.237

2.  Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta.

Authors:  F Boudsocq; S Iwai; F Hanaoka; R Woodgate
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

Review 3.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

4.  The translesion DNA polymerase zeta plays a major role in Ig and bcl-6 somatic hypermutation.

Authors:  H Zan; A Komori; Z Li; A Cerutti; A Schaffer; M F Flajnik; M Diaz; P Casali
Journal:  Immunity       Date:  2001-05       Impact factor: 31.745

5.  Localization of DNA polymerases eta and iota to the replication machinery is tightly co-ordinated in human cells.

Authors:  Patricia Kannouche; Antonio R Fernández de Henestrosa; Barry Coull; Antonio E Vidal; Colin Gray; Daniel Zicha; Roger Woodgate; Alan R Lehmann
Journal:  EMBO J       Date:  2003-03-03       Impact factor: 11.598

6.  Localization of DNA polymerases eta and iota to the replication machinery is tightly co-ordinated in human cells.

Authors:  Patricia Kannouche; Antonio R Fernández de Henestrosa; Barry Coull; Antonio E Vidal; Colin Gray; Daniel Zicha; Roger Woodgate; Alan R Lehmann
Journal:  EMBO J       Date:  2002-11-15       Impact factor: 11.598

7.  Translesion replication of benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyadenosine and deoxyguanosine by human DNA polymerase iota.

Authors:  Ekaterina G Frank; Jane M Sayer; Heiko Kroth; Eiji Ohashi; Haruo Ohmori; Donald M Jerina; Roger Woodgate
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

8.  Difference between deoxyribose- and tetrahydrofuran-type abasic sites in the in vivo mutagenic responses in yeast.

Authors:  Chie Otsuka; Sachi Sanadai; Yasuhiro Hata; Hisanori Okuto; Vladimir N Noskov; David Loakes; Kazuo Negishi
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

9.  Error-prone lesion bypass by human DNA polymerase eta.

Authors:  Y Zhang; F Yuan; X Wu; O Rechkoblit; J S Taylor; N E Geacintov; Z Wang
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

10.  Identification of a novel REV1-interacting motif necessary for DNA polymerase kappa function.

Authors:  Eiji Ohashi; Tomo Hanafusa; Keijiro Kamei; Ihnyoung Song; Junya Tomida; Hiroshi Hashimoto; Cyrus Vaziri; Haruo Ohmori
Journal:  Genes Cells       Date:  2009-01-06       Impact factor: 1.891

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