Literature DB >> 11095682

Error-prone lesion bypass by human DNA polymerase eta.

Y Zhang1, F Yuan, X Wu, O Rechkoblit, J S Taylor, N E Geacintov, Z Wang.   

Abstract

DNA lesion bypass is an important cellular response to genomic damage during replication. Human DNA polymerase eta (Pol(eta)), encoded by the Xeroderma pigmentosum variant (XPV) gene, is known for its activity of error-free translesion synthesis opposite a TT cis-syn cyclobutane dimer. Using purified human Pol(eta), we have examined bypass activities of this polymerase opposite several other DNA lesions. Human Pol(eta) efficiently bypassed a template 8-oxoguanine, incorporating an A or a C opposite the lesion with similar efficiencies. Human Pol(eta) effectively bypassed a template abasic site, incorporating an A and less frequently a G opposite the lesion. Significant -1 deletion was also observed when the template base 5' to the abasic site is a T. Human Pol(eta) partially bypassed a template (+)-trans-anti-benzo[a]pyrene-N:(2)-dG and predominantly incorporated an A, less frequently a T, and least frequently a G or a C opposite the lesion. This specificity of nucleotide incorporation correlates well with the known mutation spectrum of (+)-trans-anti-benzo[a]pyrene-N:(2)-dG lesion in mammalian cells. These results show that human Pol(eta) is capable of error-prone translesion DNA syntheses in vitro and suggest that Pol(eta) may bypass certain lesions with a mutagenic consequence in humans.

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Year:  2000        PMID: 11095682      PMCID: PMC115171          DOI: 10.1093/nar/28.23.4717

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  47 in total

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Authors:  W Lin; H Xin; Y Zhang; X Wu; F Yuan; Z Wang
Journal:  Nucleic Acids Res       Date:  1999-11-15       Impact factor: 16.971

2.  Coding properties of a unique apurinic/apyrimidinic site replicated in mammalian cells.

Authors:  J B Cabral Neto; R E Cabral; A Margot; F Le Page; A Sarasin; A Gentil
Journal:  J Mol Biol       Date:  1994-07-29       Impact factor: 5.469

3.  Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro.

Authors:  Y Zhang; F Yuan; X Wu; M Wang; O Rechkoblit; J S Taylor; N E Geacintov; Z Wang
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

4.  The Saccharomyces cerevisiae RAD30 gene, a homologue of Escherichia coli dinB and umuC, is DNA damage inducible and functions in a novel error-free postreplication repair mechanism.

Authors:  J P McDonald; A S Levine; R Woodgate
Journal:  Genetics       Date:  1997-12       Impact factor: 4.562

5.  Mechanisms of accurate translesion synthesis by human DNA polymerase eta.

Authors:  C Masutani; R Kusumoto; S Iwai; F Hanaoka
Journal:  EMBO J       Date:  2000-06-15       Impact factor: 11.598

6.  Error-prone bypass of certain DNA lesions by the human DNA polymerase kappa.

Authors:  E Ohashi; T Ogi; R Kusumoto; S Iwai; C Masutani; F Hanaoka; H Ohmori
Journal:  Genes Dev       Date:  2000-07-01       Impact factor: 11.361

Review 7.  DNA polymerase zeta and the control of DNA damage induced mutagenesis in eukaryotes.

Authors:  C W Lawrence; D C Hinkle
Journal:  Cancer Surv       Date:  1996

8.  The function of the human homolog of Saccharomyces cerevisiae REV1 is required for mutagenesis induced by UV light.

Authors:  P E Gibbs; X D Wang; Z Li; T P McManus; W G McGregor; C W Lawrence; V M Maher
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

9.  Efficient translesion replication past oxaliplatin and cisplatin GpG adducts by human DNA polymerase eta.

Authors:  A Vaisman; C Masutani; F Hanaoka; S G Chaney
Journal:  Biochemistry       Date:  2000-04-25       Impact factor: 3.162

10.  Mechanism of mutation on DNA templates containing synthetic abasic sites: study with a double strand vector.

Authors:  M Takeshita; W Eisenberg
Journal:  Nucleic Acids Res       Date:  1994-05-25       Impact factor: 16.971

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  75 in total

1.  Accessibility of DNA polymerases to repair synthesis during nucleotide excision repair in yeast cell-free extracts.

Authors:  X Wu; D Guo; F Yuan; Z Wang
Journal:  Nucleic Acids Res       Date:  2001-07-15       Impact factor: 16.971

2.  Role of DNA polymerase eta in the bypass of a (6-4) TT photoproduct.

Authors:  R E Johnson; L Haracska; S Prakash; L Prakash
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

3.  Localization of DNA polymerases eta and iota to the replication machinery is tightly co-ordinated in human cells.

Authors:  Patricia Kannouche; Antonio R Fernández de Henestrosa; Barry Coull; Antonio E Vidal; Colin Gray; Daniel Zicha; Roger Woodgate; Alan R Lehmann
Journal:  EMBO J       Date:  2003-03-03       Impact factor: 11.598

4.  Localization of DNA polymerases eta and iota to the replication machinery is tightly co-ordinated in human cells.

Authors:  Patricia Kannouche; Antonio R Fernández de Henestrosa; Barry Coull; Antonio E Vidal; Colin Gray; Daniel Zicha; Roger Woodgate; Alan R Lehmann
Journal:  EMBO J       Date:  2002-11-15       Impact factor: 11.598

5.  Processing of DNA lesions by archaeal DNA polymerases from Sulfolobus solfataricus.

Authors:  Petr Grúz; Masatomi Shimizu; Francesca M Pisani; Mariarita De Felice; Yusuke Kanke; Takehiko Nohmi
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

6.  Enzymatic switching for efficient and accurate translesion DNA replication.

Authors:  Scott D McCulloch; Robert J Kokoska; Olga Chilkova; Carrie M Welch; Erik Johansson; Peter M J Burgers; Thomas A Kunkel
Journal:  Nucleic Acids Res       Date:  2004-08-27       Impact factor: 16.971

7.  Lesion (in)tolerance reveals insights into DNA replication fidelity.

Authors:  Eva Freisinger; Arthur P Grollman; Holly Miller; Caroline Kisker
Journal:  EMBO J       Date:  2004-04-01       Impact factor: 11.598

8.  Biochemical analysis of active site mutations of human polymerase η.

Authors:  Samuel C Suarez; Renee A Beardslee; Shannon M Toffton; Scott D McCulloch
Journal:  Mutat Res       Date:  2013-03-13       Impact factor: 2.433

9.  Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV.

Authors:  Yazhen Wang; Sarah K Musser; Sam Saleh; Lawrence J Marnett; Martin Egli; Michael P Stone
Journal:  Biochemistry       Date:  2008-06-19       Impact factor: 3.162

10.  Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.

Authors:  Olga Rechkoblit; Lucy Malinina; Yuan Cheng; Nicholas E Geacintov; Suse Broyde; Dinshaw J Patel
Journal:  Structure       Date:  2009-05-13       Impact factor: 5.006

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