Literature DB >> 10518552

Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily.

V L Gerlach1, L Aravind, G Gotway, R A Schultz, E V Koonin, E C Friedberg.   

Abstract

To understand the mechanisms underlying mutagenesis in eukaryotes better, we have cloned mouse and human homologs of the Escherichia coli dinB gene. E. coli dinB encodes DNA polymerase IV and greatly increases spontaneous mutations when overexpressed. The mouse and human DinB1 amino acid sequences share significant identity with E. coli DinB, including distinct motifs implicated in catalysis, suggesting conservation of the polymerase function. These proteins are members of a large superfamily of DNA damage-bypass replication proteins, including the E. coli proteins UmuC and DinB and the Saccharomyces cerevisiae proteins Rev1 and Rad30. In a phylogenetic tree, the mouse and human DinB1 proteins specifically group with E. coli DinB, suggesting a mitochondrial origin for these genes. The human DINB1 gene is localized to chromosome 5q13 and is widely expressed.

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Year:  1999        PMID: 10518552      PMCID: PMC18388          DOI: 10.1073/pnas.96.21.11922

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

Review 1.  Novel DNA polymerases offer clues to the molecular basis of mutagenesis.

Authors:  E C Friedberg; V L Gerlach
Journal:  Cell       Date:  1999-08-20       Impact factor: 41.582

Review 2.  Messenger RNA degradation in eukaryotes.

Authors:  A B Sachs
Journal:  Cell       Date:  1993-08-13       Impact factor: 41.582

3.  Compilation, alignment, and phylogenetic relationships of DNA polymerases.

Authors:  D K Braithwaite; J Ito
Journal:  Nucleic Acids Res       Date:  1993-02-25       Impact factor: 16.971

Review 4.  Mutagenesis induced by bacterial UmuDC proteins and their plasmid homologues.

Authors:  R Woodgate; S G Sedgwick
Journal:  Mol Microbiol       Date:  1992-08       Impact factor: 3.501

5.  Molecular structure of the DNA cross-link repair gene SNM1 (PSO2) of the yeast Saccharomyces cerevisiae.

Authors:  D Richter; E Niegemann; M Brendel
Journal:  Mol Gen Genet       Date:  1992-01

6.  The REV1 gene of Saccharomyces cerevisiae: isolation, sequence, and functional analysis.

Authors:  F W Larimer; J R Perry; A A Hardigree
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

7.  The Saccharomyces cerevisiae RAD18 gene encodes a protein that contains potential zinc finger domains for nucleic acid binding and a putative nucleotide binding sequence.

Authors:  J S Jones; S Weber; L Prakash
Journal:  Nucleic Acids Res       Date:  1988-07-25       Impact factor: 16.971

8.  Role of RecA protein in untargeted UV mutagenesis of bacteriophage lambda: evidence for the requirement for the dinB gene.

Authors:  A Brotcorne-Lannoye; G Maenhaut-Michel
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

9.  Identification of four conserved motifs among the RNA-dependent polymerase encoding elements.

Authors:  O Poch; I Sauvaget; M Delarue; N Tordo
Journal:  EMBO J       Date:  1989-12-01       Impact factor: 11.598

Review 10.  The scanning model for translation: an update.

Authors:  M Kozak
Journal:  J Cell Biol       Date:  1989-02       Impact factor: 10.539

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  62 in total

1.  umuDC-mediated cold sensitivity is a manifestation of functions of the UmuD(2)C complex involved in a DNA damage checkpoint control.

Authors:  M D Sutton; G C Walker
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

2.  The many faces of DNA polymerases: strategies for mutagenesis and for mutational avoidance.

Authors:  E C Friedberg; W J Feaver; V L Gerlach
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

3.  Bridging the gap: a family of novel DNA polymerases that replicate faulty DNA.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

Review 4.  A new class of errant DNA polymerases provides candidates for somatic hypermutation.

Authors:  B Tippin; M F Goodman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2001-01-29       Impact factor: 6.237

5.  umuDC-dnaQ Interaction and its implications for cell cycle regulation and SOS mutagenesis in Escherichia coli.

Authors:  M D Sutton; S Murli; T Opperman; C Klein; G C Walker
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

6.  Role of the dinB gene product in spontaneous mutation in Escherichia coli with an impaired replicative polymerase.

Authors:  B S Strauss; R Roberts; L Francis; P Pouryazdanparast
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

7.  Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta.

Authors:  F Boudsocq; S Iwai; F Hanaoka; R Woodgate
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

Review 8.  Evidence that replication fork components catalyze establishment of cohesion between sister chromatids.

Authors:  D R Carson; M F Christman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

Review 9.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

10.  Accessibility of DNA polymerases to repair synthesis during nucleotide excision repair in yeast cell-free extracts.

Authors:  X Wu; D Guo; F Yuan; Z Wang
Journal:  Nucleic Acids Res       Date:  2001-07-15       Impact factor: 16.971

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