Literature DB >> 10860978

Structural hierarchy in erythrocruorin, the giant respiratory assemblage of annelids.

W E Royer1, K Strand, M van Heel, W A Hendrickson.   

Abstract

Many annelids, including the earthworm Lumbricus terrestris, have giant cooperative respiratory proteins (molecular masses greater than 3.5 million Da) freely dissolved in the blood, rather than packaged in cells. These complexes, termed either erythrocruorins or hemoglobins, are assembled from many copies of both hemoglobin subunits and nonhemoglobin or "linker" subunits. In this paper, we present the crystal structure of Lumbricus erythrocruorin at 5.5-A resolution, which reveals a remarkable hierarchical organization of 144 oxygen-binding hemoglobin subunits and 36 nonhemoglobin linker subunits. The hemoglobin chains arrange in novel dodecameric substructures. Twelve trimeric linker complexes project triple-stranded helical coiled-coil "spokes" toward the center of the complex; interdigitation of these spokes appears crucial for stabilization. The resulting complex of linker chains forms a scaffold on which twelve hemoglobin dodecamers assemble. This structure specifies the unique, self-limited assemblage of a highly cooperative single molecule.

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Year:  2000        PMID: 10860978      PMCID: PMC16507          DOI: 10.1073/pnas.97.13.7107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  The role of linkers in the reassembly of the 3.6 MDa hexagonal bilayer hemoglobin from Lumbricus terrestris.

Authors:  A R Kuchumov; J C Taveau; J N Lamy; J S Wall; R E Weber; S N Vinogradov
Journal:  J Mol Biol       Date:  1999-06-25       Impact factor: 5.469

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Journal:  Cell       Date:  1992-12-24       Impact factor: 41.582

4.  X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil.

Authors:  E K O'Shea; J D Klemm; P S Kim; T Alber
Journal:  Science       Date:  1991-10-25       Impact factor: 47.728

5.  Ribbons.

Authors:  M Carson
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  The locked rotation function.

Authors:  L A Tong; M G Rossmann
Journal:  Acta Crystallogr A       Date:  1990-10-01       Impact factor: 2.290

7.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

8.  Molecular shape of Lumbricus terrestris erythrocruorin studied by electron microscopy and image analysis.

Authors:  E J Boekema; M van Heel
Journal:  Biochim Biophys Acta       Date:  1988-12-02

9.  Spectrophotometric, electron paramagnetic resonance and oxygen binding studies on the hemoglobin from the marine polychaete Perinereis aibuhitensis (Grübe): comparative physiology of hemoglobin.

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Journal:  J Biochem       Date:  1989-09       Impact factor: 3.387

10.  LearnCoil-VMF: computational evidence for coiled-coil-like motifs in many viral membrane-fusion proteins.

Authors:  M Singh; B Berger; P S Kim
Journal:  J Mol Biol       Date:  1999-07-30       Impact factor: 5.469

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  18 in total

1.  An electrospray ionization mass spectrometric study of the subunit structure of the giant hemoglobin from the leech Nephelopsis oscura.

Authors:  Brian N Green; Serge N Vinogradov
Journal:  J Am Soc Mass Spectrom       Date:  2004-01       Impact factor: 3.109

2.  Mass distributions of a macromolecular assembly based on electrospray ionization mass spectrometric masses of the constituent subunits.

Authors:  Leonid Hanin; Brian Green; Franck Zal; Serge Vinogradov
Journal:  J Biosci       Date:  2003-09       Impact factor: 1.826

3.  Small angle X-ray scattering studies and modeling of Eudistylia vancouverii chlorocruorin and Macrobdella decora hemoglobin.

Authors:  Angelika Krebs; Helmut Durchschlag; Peter Zipper
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

4.  Sulfide binding is mediated by zinc ions discovered in the crystal structure of a hydrothermal vent tubeworm hemoglobin.

Authors:  Jason F Flores; Charles R Fisher; Susan L Carney; Brian N Green; John K Freytag; Stephen W Schaeffer; William E Royer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-14       Impact factor: 11.205

5.  Gene structure and molecular phylogeny of the linker chains from the giant annelid hexagonal bilayer hemoglobins.

Authors:  Christine Chabasse; Xavier Bailly; Sophie Sanchez; Morgane Rousselot; Franck Zal
Journal:  J Mol Evol       Date:  2006-07-12       Impact factor: 2.395

6.  Evolution of Single-Domain Globins in Hydrothermal Vent Scale-Worms.

Authors:  J Projecto-Garcia; A-S Le Port; T Govindji; D Jollivet; S W Schaeffer; S Hourdez
Journal:  J Mol Evol       Date:  2017-11-01       Impact factor: 2.395

7.  Low resolution crystal structure of Arenicola erythrocruorin: influence of coiled coils on the architecture of a megadalton respiratory protein.

Authors:  William E Royer; Michael N Omartian; James E Knapp
Journal:  J Mol Biol       Date:  2006-10-11       Impact factor: 5.469

8.  A rapid method for characterization of protein relatedness using feature vectors.

Authors:  Kareem Carr; Eleanor Murray; Ebenezer Armah; Rong L He; Stephen S-T Yau
Journal:  PLoS One       Date:  2010-03-05       Impact factor: 3.240

9.  Globin and linker sequences of the giant extracellular hemoglobin from the leech Macrobdella decora.

Authors:  Tomohiko Suzuki; Serge N Vinogradov
Journal:  J Protein Chem       Date:  2003-04

10.  Radiation damage in single-particle cryo-electron microscopy: effects of dose and dose rate.

Authors:  Manikandan Karuppasamy; Fatemeh Karimi Nejadasl; Milos Vulovic; Abraham J Koster; Raimond B G Ravelli
Journal:  J Synchrotron Radiat       Date:  2011-04-09       Impact factor: 2.616

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