Literature DB >> 2174243

The locked rotation function.

L A Tong1, M G Rossmann.   

Abstract

It frequently occurs that a biological assembly in a crystallographic asymmetric unit has more than one noncrystallographic symmetry operator. For instance, a tetramer might have the point group 222 or a spherical virus will have the point group 532. A self-rotation function searches for the direction and angle of rotation of the individual noncrystallographic symmetry operations, while a cross-rotation function searches for the relationship of a structure in one unit cell with similar structures in another cell. The power of the rotation function can be greatly enhanced by searching for all noncrystallographic symmetry operators simultaneously. The procedure described previously [Rossmann, Ford, Watson & Banaszak (1972). J. Mol. Biol. 64, 237-249] has been generalized. The increased power of this 'locked' rotation function permits a good determination of the orientation of an icosahedral virus in the presence of less than 1% of the possible diffraction data to 7 A resolution. In addition, the peak-to-noise ratio is substantially improved.

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Year:  1990        PMID: 2174243     DOI: 10.1107/s0108767390005530

Source DB:  PubMed          Journal:  Acta Crystallogr A        ISSN: 0108-7673            Impact factor:   2.290


  59 in total

1.  Structure and mechanism of activity of the cyclic phosphodiesterase of Appr>p, a product of the tRNA splicing reaction.

Authors:  A Hofmann; A Zdanov; P Genschik; S Ruvinov; W Filipowicz; A Wlodawer
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

2.  High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.

Authors:  D H Juers; R H Jacobson; D Wigley; X J Zhang; R E Huber; D E Tronrud; B W Matthews
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

3.  Atomic structure of single-stranded DNA bacteriophage phi X174 and its functional implications.

Authors:  R McKenna; D Xia; P Willingmann; L L Ilag; S Krishnaswamy; M G Rossmann; N H Olson; T S Baker; N L Incardona
Journal:  Nature       Date:  1992-01-09       Impact factor: 49.962

4.  Crystal structure of the BEACH domain reveals an unusual fold and extensive association with a novel PH domain.

Authors:  Gerwald Jogl; Yang Shen; Damara Gebauer; Jiang Li; Katja Wiegmann; Hamid Kashkar; Martin Krönke; Liang Tong
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

5.  The structure of a ribosomal protein S8/spc operon mRNA complex.

Authors:  Helen J Merianos; Jimin Wang; Peter B Moore
Journal:  RNA       Date:  2004-06       Impact factor: 4.942

6.  Expression, purification, crystallization and preliminary X-ray diffraction analysis of a ribokinase from the thermohalophile Halothermothrix orenii.

Authors:  Lokesh D Kori; Andreas Hofmann; Bharat K C Patel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-27

7.  Expression, purification and preliminary crystallographic analysis of the recombinant β-glucosidase (BglA) from the halothermophile Halothermothrix orenii.

Authors:  Lokesh D Kori; Andreas Hofmann; Bharat K C Patel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-23

Review 8.  Virus crystallography.

Authors:  E E Fry; J Grimes; D I Stuart
Journal:  Mol Biotechnol       Date:  1999-08       Impact factor: 2.695

9.  Crystal structure of Trypanosoma cruzi tyrosine aminotransferase: substrate specificity is influenced by cofactor binding mode.

Authors:  W Blankenfeldt; C Nowicki; M Montemartini-Kalisz; H M Kalisz; H J Hecht
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

10.  Crystal structure of Pseudomonas aeruginosa catabolic ornithine transcarbamoylase at 3.0-A resolution: a different oligomeric organization in the transcarbamoylase family.

Authors:  V Villeret; C Tricot; V Stalon; O Dideberg
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-07       Impact factor: 11.205

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