Literature DB >> 10733986

Protein dynamics in an intermediate state of myoglobin: optical absorption, resonance Raman spectroscopy, and x-ray structure analysis.

N Engler1, A Ostermann, A Gassmann, D C Lamb, V E Prusakov, J Schott, R Schweitzer-Stenner, F G Parak.   

Abstract

A metastable state of myoglobin is produced by reduction of metmyoglobin at low temperatures. This is done either by irradiation with x-rays at 80 K or by electron transfer from photoexcited tris(2, 2'-bipyridine)-ruthenium(II) at 20 K. At temperatures above 150 K, the conformational transition toward the equilibrium deoxymyoglobin is observed. X-ray crystallography, Raman spectroscopy, and temperature-dependent optical absorption spectroscopy show that the metastable state has a six-ligated iron low-spin center. The x-ray structure at 115K proves the similarity of the metastable state with metmyoglobin. The Raman spectra yield the high-frequency vibronic modes and give additional information about the distortion of the heme. Analysis of the temperature dependence of the line shape of the Soret band reveals that a relaxation within the metastable state starts at approximately 120 K. Parameters representative of static properties of the intermediate state are close to those of CO-ligated myoglobin, while parameters representative of dynamics are close to deoxymyoglobin. Thus within the metastable state the relaxation to the equilibrium is initiated by changes in the dynamic properties of the active site.

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Year:  2000        PMID: 10733986      PMCID: PMC1300800          DOI: 10.1016/S0006-3495(00)76755-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

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Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

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Journal:  Nat Struct Biol       Date:  1997-03

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Authors:  B Melchers; E W Knapp; F Parak; L Cordone; A Cupane; M Leone
Journal:  Biophys J       Date:  1996-05       Impact factor: 4.033

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Authors:  A Cupane; M Leone; E Vitrano; L Cordone
Journal:  Eur Biophys J       Date:  1995       Impact factor: 1.733

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Authors:  S Balasubramanian; D G Lambright; M C Marden; S G Boxer
Journal:  Biochemistry       Date:  1993-03-09       Impact factor: 3.162

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Authors:  T Y Teng; V Srajer; K Moffat
Journal:  Nat Struct Biol       Date:  1994-10
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  9 in total

1.  The effect of ligand dynamics on heme electronic transition band III in myoglobin.

Authors:  Karin Nienhaus; Don C Lamb; Pengchi Deng; G Ulrich Nienhaus
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  CO migration pathways in cytochrome P450cam studied by molecular dynamics simulations.

Authors:  Liliane Mouawad; Catherine Tetreau; Safwat Abdel-Azeim; David Perahia; Daniel Lavalette
Journal:  Protein Sci       Date:  2007-03-30       Impact factor: 6.725

3.  Protein dynamics of a beta-sheet protein.

Authors:  Marius Schmidt; Klaus Achterhold; Valeriy Prusakov; Fritz G Parak
Journal:  Eur Biophys J       Date:  2009-03-07       Impact factor: 1.733

4.  A physical picture of protein dynamics and conformational changes.

Authors:  Fritz G Parak; Klaus Achterhold; Simonetta Croci; Marius Schmidt
Journal:  J Biol Phys       Date:  2008-08-27       Impact factor: 1.365

5.  Cryoradiolytic reduction of heme proteins: Maximizing dose dependent yield.

Authors:  Ilia G Denisov; Doreen C Victoria; Stephen G Sligar
Journal:  Radiat Phys Chem Oxf Engl 1993       Date:  2007-04       Impact factor: 2.858

6.  Synchrotron X-ray-induced photoreduction of ferric myoglobin nitrite crystals gives the ferrous derivative with retention of the O-bonded nitrite ligand.

Authors:  Jun Yi; Allen M Orville; John M Skinner; Michael J Skinner; George B Richter-Addo
Journal:  Biochemistry       Date:  2010-07-27       Impact factor: 3.162

7.  Redox-induced structural dynamics of Fe-heme ligand in myoglobin by X-ray absorption spectroscopy.

Authors:  S Della Longa; A Arcovito; M Benfatto; A Congiu-Castellano; M Girasole; J L Hazemann; A Lo Bosco
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

8.  EPR and ENDOR studies of Fe(II) hemoproteins reduced and oxidized at 77 K.

Authors:  Roman Davydov; Brian M Hoffman
Journal:  J Biol Inorg Chem       Date:  2007-12-06       Impact factor: 3.358

9.  A new on-axis multimode spectrometer for the macromolecular crystallography beamlines of the Swiss Light Source.

Authors:  Robin L Owen; Arwen R Pearson; Alke Meents; Pirmin Boehler; Vincent Thominet; Clemens Schulze-Briese
Journal:  J Synchrotron Radiat       Date:  2009-02-25       Impact factor: 2.616

  9 in total

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