Literature DB >> 10535942

Opening of a monomer-monomer interface of the trimeric bacteriophage T4-coded GP45 sliding clamp is required for clamp loading onto DNA.

G J Latham1, F Dong, P Pietroni, J M Dozono, D J Bacheller, P H von Hippel.   

Abstract

The replication system of bacteriophage T4 uses a trimeric ring-shaped processivity clamp (gp45) to tether the replication polymerase (gp43) to the template-primer DNA. This ring is placed onto the DNA by an ATPase-driven clamp-loading complex (gp44/62) where it then transfers, in closed form, to the polymerase. It generally has been assumed that one of the functions of the loading machinery is to open the clamp to place it around the DNA. However, the mechanism by which this occurs has not been fully defined. In this study we design and characterize a double-mutant gp45 protein that contains pairs of cysteine residues located at each monomer-monomer interface of the trimeric clamp. This mutant protein is functionally equivalent to wild-type gp45. However, when all three monomer-monomer interfaces are tethered by covalent crosslinks formed (reversibly or irreversibly) between the cysteine pairs these closed clamps can no longer be loaded onto the DNA nor onto the polymerase, effectively eliminating processive strand-displacement DNA synthesis. Analysis of the individual steps of the clamp-loading process shows that the ATPase-dependent interactions between the clamp and the clamp loader that precede DNA binding are hyperstimulated by the covalently crosslinked ring, suggesting that binding of the closed ring induces a futile, ATP-driven, ring-opening cycle. These findings and others permit further characterization and ordering of the steps involved in the T4 clamp-loading process.

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Year:  1999        PMID: 10535942      PMCID: PMC22945          DOI: 10.1073/pnas.96.22.12448

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp.

Authors:  X P Kong; R Onrust; M O'Donnell; J Kuriyan
Journal:  Cell       Date:  1992-05-01       Impact factor: 41.582

Review 2.  Protein-protein interactions at a DNA replication fork: bacteriophage T4 as a model.

Authors:  N G Nossal
Journal:  FASEB J       Date:  1992-02-01       Impact factor: 5.191

3.  Cryoelectron microscopic visualization of functional subassemblies of the bacteriophage T4 DNA replication complex.

Authors:  E P Gogol; M C Young; W L Kubasek; T C Jarvis; P H von Hippel
Journal:  J Mol Biol       Date:  1992-03-20       Impact factor: 5.469

4.  Structural and enzymatic studies of the T4 DNA replication system. I. Physical characterization of the polymerase accessory protein complex.

Authors:  T C Jarvis; L S Paul; P H von Hippel
Journal:  J Biol Chem       Date:  1989-07-25       Impact factor: 5.157

5.  Structural and enzymatic studies of the T4 DNA replication system. II. ATPase properties of the polymerase accessory protein complex.

Authors:  T C Jarvis; L S Paul; J W Hockensmith; P H von Hippel
Journal:  J Biol Chem       Date:  1989-07-25       Impact factor: 5.157

6.  Rapid assembly of the bacteriophage T4 core replication complex on a linear primer/template construct.

Authors:  B F Kaboord; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-15       Impact factor: 11.205

Review 7.  Sliding clamps of DNA polymerases.

Authors:  J Kuriyan; M O'Donnell
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

8.  Bacteriophage T4 gene 45. Sequences of the structural gene and its protein product.

Authors:  E K Spicer; J A Noble; N G Nossal; W H Konigsberg; K R Williams
Journal:  J Biol Chem       Date:  1982-08-10       Impact factor: 5.157

9.  Construction and characterization of a bacteriophage T4 DNA polymerase deficient in 3'-->5' exonuclease activity.

Authors:  M W Frey; N G Nossal; T L Capson; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-01       Impact factor: 11.205

10.  Assembly of a functional replication complex without ATP hydrolysis: a direct interaction of bacteriophage T4 gp45 with T4 DNA polymerase.

Authors:  M K Reddy; S E Weitzel; P H von Hippel
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

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  4 in total

Review 1.  Replication clamps and clamp loaders.

Authors:  Mark Hedglin; Ravindra Kumar; Stephen J Benkovic
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-04-01       Impact factor: 10.005

Review 2.  Bacteriophage T4 genome.

Authors:  Eric S Miller; Elizabeth Kutter; Gisela Mosig; Fumio Arisaka; Takashi Kunisawa; Wolfgang Rüger
Journal:  Microbiol Mol Biol Rev       Date:  2003-03       Impact factor: 11.056

3.  Multiple ATP binding is required to stabilize the "activated" (clamp open) clamp loader of the T4 DNA replication complex.

Authors:  Paola Pietroni; Peter H von Hippel
Journal:  J Biol Chem       Date:  2008-08-01       Impact factor: 5.157

Review 4.  Processivity factor of DNA polymerase and its expanding role in normal and translesion DNA synthesis.

Authors:  Zhihao Zhuang; Yongxing Ai
Journal:  Biochim Biophys Acta       Date:  2009-07-01
  4 in total

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