Literature DB >> 10388771

Evolution of the internal dynamics of two globular proteins from dry powder to solution.

J Pérez1, J M Zanotti, D Durand.   

Abstract

Myoglobin and lysozyme picosecond internal dynamics in solution is compared to that in hydrated powders by quasielastic incoherent neutron scattering. This technique is sensitive to the motions of the nonexchangeable hydrogen atoms in a sample. Because these are homogeneously distributed throughout the protein structure, the average dynamics of the protein is described. We first propose an original data treatment to deal with the protein global motions in the case of solution samples. The validity of this treatment is checked by comparison with classical measurements of the diffusion constants. The evolution with the scattering vector of the width and relative contribution of the quasielastic component was then used to derive information on the amount of local diffusive motions and their characteristic average relaxation time. From dry powder to coverage by one water layer, the surface side chains progressively acquire the possibility to diffuse locally. On subsequent hydration, the main effect of water is to improve the rate of these diffusive motions. Motions with higher average amplitude occur in solution, about three times more than for a hydrated powder at complete coverage, with a shorter average relaxation time, approximately 4.5 ps compared to 9.4 ps for one water monolayer.

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Year:  1999        PMID: 10388771      PMCID: PMC1300343          DOI: 10.1016/S0006-3495(99)76903-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  20 in total

1.  Molecular rigid-body displacements in a tetragonal lysozyme crystal confirmed by X-ray diffuse scattering.

Authors:  J Pérez; P Faure; J P Benoit
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1996-07-01

2.  The energy landscapes and motions of proteins.

Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

3.  Dynamics of hydrogen atoms in superoxide dismutase by quasielastic neutron scattering.

Authors:  C Andreani; A Filabozzi; F Menzinger; A Desideri; A Deriu; D Di Cola
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

4.  Internal molecular motions of bacteriorhodopsin: hydration-induced flexibility studied by quasielastic incoherent neutron scattering using oriented purple membranes.

Authors:  J Fitter; R E Lechner; G Buldt; N A Dencher
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

5.  Interactions of lysozyme in concentrated electrolyte solutions from dynamic light-scattering measurements.

Authors:  D E Kuehner; C Heyer; C Rämsch; U M Fornefeld; H W Blanch; J M Prausnitz
Journal:  Biophys J       Date:  1997-12       Impact factor: 4.033

6.  Picosecond dynamical changes on denaturation of yeast phosphoglycerate kinase revealed by quasielastic neutron scattering.

Authors:  V Receveur; P Calmettes; J C Smith; M Desmadril; G Coddens; D Durand
Journal:  Proteins       Date:  1997-07

7.  Water-coupled low-frequency modes of myoglobin and lysozyme observed by inelastic neutron scattering.

Authors:  M Diehl; W Doster; W Petry; H Schober
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

8.  Thermal motions and function of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering.

Authors:  M Ferrand; A J Dianoux; W Petry; G Zaccaï
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-15       Impact factor: 11.205

9.  Protein diffusion coefficient measurements by laminar flow analysis: method and applications.

Authors:  R R Walters; J F Graham; R M Moore; D J Anderson
Journal:  Anal Biochem       Date:  1984-07       Impact factor: 3.365

10.  Protein hydration dynamics in aqueous solution: a comparison of bovine pancreatic trypsin inhibitor and ubiquitin by oxygen-17 spin relaxation dispersion.

Authors:  V P Denisov; B Halle
Journal:  J Mol Biol       Date:  1995-02-03       Impact factor: 5.469

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  47 in total

1.  Radially softening diffusive motions in a globular protein.

Authors:  S Dellerue; A J Petrescu; J C Smith; M C Bellissent-Funel
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

2.  Solvent dependence of dynamic transitions in protein solutions.

Authors:  V Réat; R Dunn; M Ferrand; J L Finney; R M Daniel; J C Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

3.  Dynamic transition associated with the thermal denaturation of a small Beta protein.

Authors:  Daniela Russo; Javier Pérez; Jean-Marc Zanotti; Michel Desmadril; Dominique Durand
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

4.  A measure of conformational entropy change during thermal protein unfolding using neutron spectroscopy.

Authors:  Jörg Fitter
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

5.  Molecular dynamics decomposition of temperature-dependent elastic neutron scattering by a protein solution.

Authors:  Jennifer A Hayward; John L Finney; Roy M Daniel; Jeremy C Smith
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

6.  A model for water motion in crystals of lysozyme based on an incoherent quasielastic neutron-scattering study.

Authors:  C Bon; A J Dianoux; M Ferrand; M S Lehmann
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

7.  Effect of the environment on the protein dynamical transition: a neutron scattering study.

Authors:  Alessandro Paciaroni; Stefania Cinelli; Giuseppe Onori
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

8.  Protein dynamics in solution and powder measured by incoherent elastic neutron scattering: the influence of Q-range and energy resolution.

Authors:  Frank Gabel
Journal:  Eur Biophys J       Date:  2004-09-16       Impact factor: 1.733

9.  Hot and crowded: new insights into the dynamics of thermophilic enzymes from multiscale modeling.

Authors:  Matthias Heyden; Douglas J Tobias
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

10.  Crowding induces differences in the diffusion of thermophilic and mesophilic proteins: a new look at neutron scattering results.

Authors:  Enrique Marcos; Pau Mestres; Ramon Crehuet
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

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