Literature DB >> 9990850

Core promoter elements can regulate transcription on a separate chromosome in trans.

J R Morris1, P K Geyer, C T Wu.   

Abstract

Transvection can cause the expression of a gene to be sensitive to the proximity of a homolog. It can account for many cases of intragenic complementation at the Drosophila yellow gene, where one mode of transvection involves the action of enhancers in trans on a promoter present on a separate chromosome. Our goal was to identify cis-acting elements that regulate the trans action of enhancers. Using gene replacement, we altered two core promoter elements at yellow and tested the resulting alleles for their ability to support transvection. We found that the TATA box and initiator element can regulate transvection.

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Year:  1999        PMID: 9990850      PMCID: PMC316431          DOI: 10.1101/gad.13.3.253

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  36 in total

Review 1.  Altered gene expression in plants due to trans interactions between homologous genes.

Authors:  R Jorgensen
Journal:  Trends Biotechnol       Date:  1990-12       Impact factor: 19.536

2.  Modulation of enhancer-promoter interactions by insulators in the Drosophila embryo.

Authors:  H Cai; M Levine
Journal:  Nature       Date:  1995-08-10       Impact factor: 49.962

3.  Transvection in the iab-5,6,7 region of the bithorax complex of Drosophila: homology independent interactions in trans.

Authors:  R Hopmann; D Duncan; I Duncan
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

4.  Genetic evidence for promoter competition in Saccharomyces cerevisiae.

Authors:  J E Hirschman; K J Durbin; F Winston
Journal:  Mol Cell Biol       Date:  1988-11       Impact factor: 4.272

5.  TAFs and TFIIA mediate differential utilization of the tandem Adh promoters.

Authors:  S K Hansen; R Tjian
Journal:  Cell       Date:  1995-08-25       Impact factor: 41.582

6.  A genetic analysis of the Suppressor 2 of zeste complex of Drosophila melanogaster.

Authors:  C T Wu; M Howe
Journal:  Genetics       Date:  1995-05       Impact factor: 4.562

7.  On the molecular mechanism of gypsy-induced mutations at the yellow locus of Drosophila melanogaster.

Authors:  P K Geyer; C Spana; V G Corces
Journal:  EMBO J       Date:  1986-10       Impact factor: 11.598

8.  Tissue-specific transcriptional enhancers may act in trans on the gene located in the homologous chromosome: the molecular basis of transvection in Drosophila.

Authors:  P K Geyer; M M Green; V G Corces
Journal:  EMBO J       Date:  1990-07       Impact factor: 11.598

9.  Molecular analysis of the yellow locus of Drosophila.

Authors:  W Chia; G Howes; M Martin; Y B Meng; K Moses; S Tsubota
Journal:  EMBO J       Date:  1986-12-20       Impact factor: 11.598

10.  Trans regulation in the Ultrabithorax gene of Drosophila: alterations in the promoter enhance transvection.

Authors:  A Martínez-Laborda; A González-Reyes; G Morata
Journal:  EMBO J       Date:  1992-10       Impact factor: 11.598

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  32 in total

1.  Enhancer action in trans is permitted throughout the Drosophila genome.

Authors:  Ji-Long Chen; Kathryn L Huisinga; Michaela M Viering; Sharon A Ou; C-ting Wu; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

2.  A test for transvection in plants: DNA pairing may lead to trans-activation or silencing of complex heteroalleles in tobacco.

Authors:  M Matzke; M F Mette; J Jakowitsch; T Kanno; E A Moscone; J van der Winden; A J Matzke
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

3.  An endogenous suppressor of hairy-wing insulator separates regulatory domains in Drosophila.

Authors:  Timothy J Parnell; Michaela M Viering; Astrid Skjesol; Cecilia Helou; Emily J Kuhn; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-03       Impact factor: 11.205

4.  Enhancer choice in cis and in trans in Drosophila melanogaster: role of the promoter.

Authors:  James R Morris; Dmitri A Petrov; Anne M Lee; Chao-Ting Wu
Journal:  Genetics       Date:  2004-08       Impact factor: 4.562

5.  Comparing enhancer action in cis and in trans.

Authors:  Jack R Bateman; Justine E Johnson; Melissa N Locke
Journal:  Genetics       Date:  2012-05-29       Impact factor: 4.562

Review 6.  Long-Range Chromatin Interactions.

Authors:  Job Dekker; Tom Misteli
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-10-01       Impact factor: 10.005

Review 7.  Sometimes the result is not the answer: the truths and the lies that come from using the complementation test.

Authors:  R Scott Hawley; William D Gilliland
Journal:  Genetics       Date:  2006-09       Impact factor: 4.562

8.  A novel multidomain transcription coactivator SAYP can also repress transcription in heterochromatin.

Authors:  Yulii V Shidlovskii; Aleksey N Krasnov; Julia V Nikolenko; Ljubov A Lebedeva; Marina Kopantseva; Maria A Ermolaeva; Yurij V Ilyin; Elena N Nabirochkina; Pavel G Georgiev; Sofia G Georgieva
Journal:  EMBO J       Date:  2004-12-16       Impact factor: 11.598

9.  Drosophila gypsy insulator and yellow enhancers regulate activity of yellow promoter through the same regulatory element.

Authors:  Larisa Melnikova; Margarita Kostuchenko; Margarita Silicheva; Pavel Georgiev
Journal:  Chromosoma       Date:  2007-11-10       Impact factor: 4.316

10.  Enhancer blocking and transvection at the Drosophila apterous locus.

Authors:  Daryl Gohl; Martin Müller; Vincenzo Pirrotta; Markus Affolter; Paul Schedl
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

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